Template-based Modeling Results for YHGE_ECOLI

Submitted Primary Sequence

>Length 574
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGYFVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKVLADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGERLNVNLNE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGYFVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKVLADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGERLNVNLNE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGYFVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKVLADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGERLNVNLNE
5542311221100000000000000000001000332100000000000000000120121323211000000000000000113131311211202210010000000000100110132122323212021001000210011101111201122111101300300102001100121310000000000000000020023002001300010031011100000001212121201110032110000000000000000101222342222110001000100000010000000000001023110023100000000010010000000102432311210103001000000000000010110111100011100212233221331101002201320220021033222224223102101201323332333223310122121022223122200110131223122013420000000003222321100011332100000012444201000001123322232012003313121324112100021120223245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDNVELSPATRWGMIATGLLQGLVCYLLIAWLSGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFNTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGYFVSIVWRKGQNPVVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTSDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQQQVSEKVLADNVLIAPGSVKPDATFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTKPKAWRDLVVDGERLNVNLNE
1	SPARKS	2xwub	0.130	0.923	1.032	threading_1	LDQVEHW------QSFLALVNMIMFCTGIPGHYPVNETT----SSLTLTFWYTLQDDILSFEKQAVYQQVYRPVYFQLVDVLLHKGFWSSDEKEQFRIYRVDISDTLMYVYEMLAELLSDKLGRLLTSYSWQHTEALLYGFQSIANYSDVVPGLIGLIVQLADTVMFTIGA--LSEWLADHPVMINSVLPLVLHA-LGNPELSVSSVSTLKKICRECKYDLPPYAANIVAVSQ--------DVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNPYIQQLEKLAPNPSNKLAIVHILGLLSNLFTTLDISHPVVVVLQQVFQLIQKVLSKAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFLL---VTSVTLTLFQQGPR--DHPDIVDSFMQLLAQALKLCERLDVKAVFQCAVLALKFPEAPCGFFTELLPRCGEVES---------VGKVVQEDGRMIAVLEAIGGQFALNKHCFSLLSMWEALQPPGFPSALSPEQKDTFSQQLRERVNKRRVKEMVKEG---------
2	PROSPECT2	1w63A	0.080	0.889	2.148	threading_2	MPAPIRLRELIRTIEEREMIQKECAAIRSSFREEDNTY-------RCRNVAKLLYMHMLGYPAHFGQLECLKLIA---------------SQKFTDKRIGYLGAMLLQDVHLLMTNCIKNDLNHSTQ--FVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRST---IVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMDCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSAVPNLIQLITNSVEMHAYQRLYKAILGDYSQQPLVQVDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTA----------------------------------IMKLSTRFTCTVNRIKKVVSIYGSSIKYDHMRSALLERMP---VMEK
3	PPA-I	3zuxA	0.092	0.530	1.223	threading_3	-----NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDDILFKHPKVVIIGVIAQFAIM-----PATAWCLSKLLLPAEIAVGVILVGCCP-----------GGTASNVMTYLANVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGML---MSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGAS---KGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTG-------LPYDAQKALTIEVGMQNSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	1b3ua	0.108	0.871	2.121	threading_4	AAADGIALALGVERTRSELLPFLTDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAIS----------HEHSPSDLEAHFVPLVKRLAFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLEDLEALVMPTLRQAAYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCE-----NLSADCRENVIMSQILPCIKELVQHVKSALASVIMGLSPILG--KDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLLGVEFFDEKLNSLCMAHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYCGQDITTKHMMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDV-----------------------------------KYFAQEALTVLS----------------------LA
5	PPA-I	3g61A4	0.108	0.564	1.124	threading_5	--GWKLTLVILAISPVLGLSAGIWAKILSSFTDK-----------ELHAYAKAGAVAEEVLGQKKELERYNNNLEEAKRLGIKKAITA-----NISMGAAFLLIYASYALAFWYGTSLVISKEYSLDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGE--ILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGA---------TGSRLAVIFQNIANLGTGIIISLIYF---------------ENVLLVFSAIVFGAMAVGQVSSFAPDY--------AKATVSASHIIRIIEKTPEIDSY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	PROSPECT2	1jdha	0.101	0.824	2.111	threading_6	AVVNLIRAIPELTKLLNQVVVNKAAVMVHQLSKKEAS------RHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNL----------SHHREGLLAIFKSGGIPALVKML--------------GSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVAL--------LNKTNVKFLAITTDCLQILAYGNQESKLIILAGPQALVNIMRTYYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLINVVTCAAGILSNLYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLAL----CPANHAPLREQGPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLYSPIENIQRVAAGAQDKEAAEAIEAEGATAPLTELLHSRNEGV-----------------------------------ATYAAAVLFR------------------------MS
7	PPA-I	2ooeA	0.096	0.726	1.105	threading_7	KGKLPMAQAYDFALDKIGSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEG--------------INIHLAKKMIEDMNARRVAKEYETVMKGLDRNAPSVPPQPQEAQQVDMWKKYIQWEKSEDQTLITKRVMFAYEQCLLVLGHH--PDIWYEAAQYLEQSSKLLAEKGD--MNNAKLFSDEAANIYERAISTLLKKNMLLYFAYA--------DYEESRMKYEKVHSIYNRLLAI-------------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFEL----GLKKYGDIPEYVLAYIDYLSHLNE------DNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNI-----------GDLASILKVEKRRFTAFREEYEGKETALLVDRYKFMDLYPCSASELKALGYKDV-------------------------------------------------------------------------------------------------
8	PROSPECT2	1qgra	0.103	0.998	2.103	threading_8	MENPGNSQVARVAAGASQCVAGIACAELVANVTNPNSTEHMKESTLEAILTAIIQGMRKEEPSNNVKLAATNALLNSLIMQVVCEATQCPDTRLQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTCKAAGVCLMLLATCCEDDIVPHV-LPFIKEHIKNPDWRYRDAAVMAFGCPSQLKPLVIQAMPTLIELMVVRDTAAWTVGRICELLPEAAINDVYLAPLLQSAEPRVASNVCWAFSSLAEAAYEAADVADDQEELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHAFGKDVLKLVEARPMIKLKNQA
9	PPA-I	3g61A1	0.091	0.538	1.052	threading_9	----------------------------------------------------VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVAL-----PLMMLIFGDMTDSFASVGNVSKNS------TNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIKFFHAIMNQEIGWFDVVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKSLTREQKFETMYAQSLQIPYRNAMKKAHV-------FGITFSFTQAMMYFSYAACFRFGAYLVTQQLMT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	PROSPECT2	2bkuB	0.084	0.974	2.055	threading_10	MSTAEFAQLLENSILSNDNFLQFAGLSSQVLIDENTK--------LEGRILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNLTALVSIEPRIANAAAQLIAAIADIELPLMKIMVDNTGAEQPENVKRASLLALGYLIAIVQGAQSTETSKAVRLAALNALADSLIMQVVCEATQAEDIQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYEQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNGPDKVQRTYYVETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLTIINLVEQLAEATPSPIYNFYALVDGLIGAANRIDNEFNARASTSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSKSPSSVEPVADMLMGLFFRLLEKKDSAFEKYLETFSPYLLKALNQVDSPVSVLAQMISNPNARRELLCVAAQNT-------KPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKMFPDGSIKQFYGQDWVRTRSGQ

Predicted Tertiary Structure


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TM-score=0.625 to 1kpkA SCOP code=f.20.1.1	TM-score=0.590 to 1b3uA SCOP code=a.118.1.2	TM-score=0.751 to 1w63C SCOP code=i.23.1.1	TM-score=0.389 to 2r2vA SCOP code=h.1.3.1	TM-score=0.370 to 1xfdA SCOP code=b.70.3.1