Template-based Modeling Results for YHFX_ECOLI

Submitted Primary Sequence

>Length 387
MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRIQSVLLKVYSDDDFLYPGQESGFALKVLPEIVAEIQNLPGLHLAGLTHFPCLLWDEAVGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTLPLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPEIVGRYDSLGNSLGA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRIQSVLLKVYSDDDFLYPGQESGFALKVLPEIVAEIQNLPGLHLAGLTHFPCLLWDEAVGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTLPLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPEIVGRYDSLGNSLGA
CCHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCEEECCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEECCEEECCCCCEEEEEECCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCEEEEEECCEEEEECCCCCCCEEEEEECCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRIQSVLLKVYSDDDFLYPGQESGFALKVLPEIVAEIQNLPGLHLAGLTHFPCLLWDEAVGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTLPLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPEIVGRYDSLGNSLGA
421310342122002100101321311110000002101200320030044230100000110131120021023120200000203102102412020000011130213201200221110000011310210020024123212000100032211121222111231012001102403101010000010112232224221121020012012102422020110102101001002102321011010000000001023313223300000001000014220001100001312010000013333312102031123200000010123031101000001110001101000021044220100001112232235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRIQSVLLKVYSDDDFLYPGQESGFALKVLPEIVAEIQNLPGLHLAGLTHFPCLLWDEAVGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTLPLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPEIVGRYDSLGNSLGA
1	MUSTER	1sftA	0.209	0.889	2.021	threading_1	----------------------NDFHRDTWAEVDLDAIYDNVENLRRLLPD-DTHIMAVVKANAYGVQVARTALEAGASRLAVAFLDEALALREKGIEAPIL-VLGASRPADAALAAQQR-IALTVFRSDWLEEASALY-SGPFPIHFHLKMDTGMGRL------GVKEEETKRIVALIERHPHFVLEGLYHFAT---ADEVNTDYFSYQYTRFLHMLEWL---PSRPPLVHCANSAASLRFP---DRTFNMVRFGIAMYGLAPSPGIKPYPLKEAFSLHSRLVHVKPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRQKAPIVGRICMDQMIRLPGPLPVGTKVTLIGRQGEVISIDDVAVPCTISYRVPRIFFR--EVRNAIGA
2	SPARKS	1bd0a	0.172	0.899	4.032	threading_2	----------------------NDFHRDTWAEVDLDAIYDNVENLRRLLPD-DTHIMAVVKANAGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPIL--VLGASRPADAALAAQQRIALTVFRSDWLEEASALY-SGPFPIHFHLKMDTGMGRL-----GVKDEEETKRIVALIERHPHFVLEGLY--THFATADEVNTDYFSYQYTRFLHMLEWLPS---RPPLVHCANSAASLRFP---DRTFNMVRFGIAMYGLAPSPGIKPYPLKEAFSLHSRLVHVKPGEKVSYGATYTAQTEEWIGTIPIGYADGWLGQKAPIVGRICMDQCMILPGPLPVGTKVTLIGRQGEVISIDDVARHLEPCTISYRVPRIFFRHKRIMEV
3	PROSPECT2	1xfcA	0.163	0.871	3.038	threading_3	L---------------------------AEAMVDLGAIEHNVRVLREHA--GHAQLMAVVKAGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGP--ALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPA---QFPAMLTALRQAMAEDAVRLRGLMSHM-------PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSN---SSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGGRITRTY------REA
4	PPA-I	1xfcA	0.164	0.868	2.971	threading_4	---------------------------LAEAMVDLGAIEHNVRVLREHAG--HAQLMAVVKADGGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGID--FGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPA---QFPAMLTALRQAMAEDAVRLRGLM--SHMPDDS-----INDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARP---DLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRRRCPGVGRICMDQFMVDPLDVAEGDEAILFGPGIRGPTAQDWADLVGTSPRGRITRTYREA-------
5	HHPRED-l	2vd8_A	0.193	0.804	3.447	threading_5	----------------------EAPFYRDTWVVDLDAIYNNVTHI-EFIPS-DVEIFAVV-GNAYGVPVA-IALEAGATRLAVAFLDEALVLRRAGITAPILVLG-PSPPRDINVAAENDV-ALTVFQ-EWVDEAI--LWDGSSTM-YHINFDSGMGRI------GIRE-EL-GFL-SLEGAPFLELEGVTHFA---TADEVETSYFD-QYNTFLEQLSWL-EFGVDP-FVHT--ANSAATL-RFQGITFNAVRIGIAMYGLSPSVEIRPF-LEPALSLHT-VAHVI-GDGISYNVTYRT-TEIATVAIGYADGWLRRLQGF-EV--------LVNG-RVPIVGRVTMD---QFMI---HL--PCEVPLGT-VTL--IGRQGDEIS-
6	HHPRED-g	1bd0_A	0.180	0.891	3.395	threading_6	----------------------NDFHRDTWAEVDLDAIYDNVENLRRLLPD-DTHIMAVVKANAYGHGVARTALEAGASRLAVAFLDEALALREKGIEAPILVLGASRP--ADAALAAQQRIALTVFRSDWLEEASAL-YSGPFPIHFHLKMDTGMGRLGVK-----DEEETKRIVALIERHPHFVLEGL--YTHFATADEVNTDYFSYQYTRFLHM---LEWLPSRPPLVHCANSAASLRFP---DRTFNMVRFGIAMYGLAPSPGIKPYPLKEAFSLHSRLVHVKPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRQKAPIVGRICMDQCMIRLPPLPVGTKVTLIGRQGDVISIDDVARPCTISYRVPRI---FFRHKRIMEV
7	SP3	1bd0a	0.179	0.897	4.180	threading_7	----------------------NDFHRDTWAEVDLDAIYDNVENLRRLL-PDDTHIMAVVKANAGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPIL--VLGASRPADAALAAQQRIALTVFRSDWLEEASALY-SGPFPIHFHLKMDTGMGRL-----GVKDEEETKRIVALIERHPHFVLEGLY--THFATADEVNTDYFSYQYTRFLHMLEWL---PSRPPLVHCANSAASLRFP---DRTFNMVRFGIAMYGLAPSPGIKPYPLKEAFSLHSRLVHVKPGEKVSYGATYTAQTEEWIGTIPIGYADGWLGQKAPIVGRICMDQCMILPGPLPVGTKVTLIGRQGEVISIDDVARHLEPCTISYRVPRIFFRHKNAIG-
8	SAM-T99	3e5pB	0.167	0.837	2.925	threading_8	-----------------------GWHRPTRLHIDTQAITENVQKECQRLPE-GTALFAVVKANGYGHGSAKAAKKGGATGFCVALLDEAIELREAGVQDPILI-LSVVDLAYVPLLIQYDL-SVTVATQEWLEALQQLTPESNTPLRVHLKVDTGM-----GRIGFLTPEETKQAVRFVQSHKEFLWEGI--FTHFSTADEIDTSYFEKQAGRFKAVLAVLEEL----RYVHVSNSATALWHPDVP---GNMIRYGVAMYGLNPSGNKPSYALKPALRLTSELIHVKRGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHL--------QGFTVLVGKRCEIVGRVCMD---QCMIRL-----AEEVPVGPVVTLVGKDG-------
9	MUSTER	1vfhA	0.173	0.894	2.015	threading_9	------------------------ETPTRYAEIDLDAVRANVRALRARAP--RSALMAVVKSNAYGVPCARAAQEAGAAWLGTATPEEALELRAAGIQGRIM--CWLWTPGGPWREAIETDIDVSVSGMWALDEVRAAARAAGRTARIQLA-DTGLGRN------GCQPADWAELVGAAVAAGTVQVTGVWHFAC---ADEPGHPSIRLQLDAFRDMLAYAEKEGVDPEVRHIANSPATLTLP---ETHFDLVRTGLAVYGVSPSPELAQLGLRPAMTLRASLALVKAGHGVSYGHHYVTESETHLALVPAGYADGIPRKIRRAAGRIAMDQFVVDEDLAEAGDEAVILGDAEREPTAEDWAQAAHVTRIGGRVPRVYLGGLEHHHH
10	SPARKS	1vfha	0.173	0.884	3.987	threading_10	-----------------------ETPTRVYAEIDLDAVRANVRALRARAP--RSALMAVVKSNAGAVPCARAAQEAGAAWLGTATPEEALELRAAGIQGRIMCWLWTPGGP--WREAIETDIDVSVSGMWALDEVRAAARAAGRTARIQLA-DTGLGRNGCQPA---DWAELVGAAVAAQAEGTVQVTGVW--SHFACADEPGHPSIRLQLDAFRDMLAYAEKEGVDPEVRHIANSPATLTL---PETHFDLVRTGLAVYGVSPSPELGQLGLRPAMTLRASLALVKAGHGVSYGHHYVTESETHLALVPAGYADGIPGKIRRAAGRIAMDQFVVDEDLAEAGDEAVILGDAERGPTAEDWAQAAHTIA--YEIV-------TRIGG

Predicted Tertiary Structure


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TM-score=0.849 to 1sftA SCOP code=b.49.2.2	TM-score=0.788 to 1sftA SCOP code=b.49.2.2	TM-score=0.873 to 1sftA SCOP code=b.49.2.2	TM-score=0.768 to 1vfhA SCOP code=b.49.2.2	TM-score=0.845 to 1vfhA SCOP code=b.49.2.2