Template-based Modeling Results for YHFW_ECOLI

Submitted Primary Sequence

>Length 408
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKLYEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLNEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGMIATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKLYEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLNEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGMIATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKLYEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLNEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGMIATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL
421000000100001213103213131210100000022023030110220001201222213233222000000111131111120001000020121131103312330121012111101221331311113201221230023013101101221000031013002001320212101100110110220022221330200011113212232213112112113342200210231212101201100001123022224221132002000210213220000000220220101301210020021003002200310343100000011111221122311222000000032122231223110000000002004022243130002102222334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKLYEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLNEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGMIATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL
1	MUSTER	3m8wA	0.272	0.936	3.075	threading_1	YKRIFLVVMDSVGIGEAPDAE--QFGDLGSDTIGHIAEHMNGLQMPNMVKLGLGNIREMKGISKVEKPLGYYTKMQEKSTGKDM-TGHWEIMGLYIDTP----FQVFPEGFPKELLDELE------EKTGRKIIGNKPASGTEILDELGQEQMETGSLIVYTSADSVLQIAAHEEVVPLDELYKICKI---ARELTLDEKYMVGRVIAR--PFVGE-PGNFTRTRHDYALKPFRTVMNELKDSDYDVIAIGKISDIYDGEGVTESLRTKSNMDGMDKLVDTLNMDFTGLSFLNLVDFDAFGHRRDPQGYGEALQEYDARLPEVFAKLKEDDLLLITADHGNDPIHPGTDHTREYVPLLAYSPSMKEGELPLRQTFADIGATVAENFGVKMPEYGTSFLNEL-------
2	SPARKS	2i09a	0.257	0.897	8.344	threading_2	FNRIHLVVLDSVGIGAAPDANNFGVPDGASDTLGHISKTVG-LNVPNMAKIGLGNIPRLKTVPAENHPTGYVTKLEEVSLGKDTMTGHWEIMGLNITEP----FDTFWNGFPEEIISKIEK-----------------FSGRKVIREANKPYSGTGELIIYTSADPVLQIAAHEDVIPLDELYRICEYARS---ITLERPALLGRIIARPTA-----------NRHDYALSPAPTVLNKLADAGVSTYAVGKINDIFNGSGITNMGHNKSNSHGVDTLIKTMGLSTKGFSFTNLVDFDAYGHRRNAHGYRDCLHEFDERLPEIIAAMKVDDLLLITADHGNDPTYAGTDHTREYVPLLAYSPSFTGNGVLPVGHYADISATIADNFGVDTAMIGESFLDKLI------
3	PROSPECT2	3m8wA	0.283	0.892	4.859	threading_3	YKRIFLVVMDSVGIGEAPDAE--QFGDLGSDTIGHIAEHMNGLQMPNMVKLGLGNIREMKGISKVEKPLGYYTKMQEKSTGKDM-TGHWEIMGLYIDTPFQVFPEGFPKELLDELEEK----------TGRKIIGNKPASGTEILDELGQEQMETGSEEVVPLDELYKICKIARELTLDEKY-------------------MVGRVIAEPGNFTRTPNR-----HDYALKPFGRTVMNELKDSDYDVIAIGKISDIYDGEGVTESLRTKSNMDGMDKLVDTLNMDFTGLSFLNLVDFDLFGHRRDPQGYGEALQEYDARLPEVFAKLKEDDLLLITADHGNDPIHPGTDHTREYVPLLAYSPSMKEGELPLRQTFADIGATVAENFGVKMPEYGTSFLNE-------L
4	PPA-I	3m8wA	0.272	0.936	5.468	threading_4	YKRIFLVVMDSVGIGEAPDAE--QFGDLGSDTIGHIAEHMNGLQMPNMVKLGLGNIREMKGISKVEKPLGYYTKMQEKSTGKD-MTGHWEIMGLYIDTP----FQVFPEGFPKELLDELE------EKTGRKIIGNKPASGTEILDELGQEQMETGSLIVYTSADSVLQIAAHEEVVPLDELYKICK---IARELTLDEKYMVGRVIAR--PFVGE-PGNFTRTRHDYALKPFRTVMNELKDSDYDVIAIGKISDIYDGEGVTESLRTKSNMDGMDKLVDTLNMDFTGLSFLNLVDFDAFGHRRDPQGYGEALQEYDARLPEVFAKLKEDDLLLITADHGNDPIHPGTDHTREYVPLLAYSPSMKGQELPLRQTFADIGATVAENFGVKMPEYGTSFLNEL-------
5	HHPRED-l	2i09_A	0.262	0.880	6.047	threading_5	FNRIHLVVLDSVGIGAAPDANN--FSNGASDTLGHISKTV-GLNVPNMAKIGLGNITPLKTVPAENHPTGYVTKLEEVSLGKDTMTGHWEIMGLNITEPFD----TFWNGFPEEIISKIEKFS------GRKVIANKPYSGT-------------GELIIYTSADPVLQIAAHEDVIPLDELYRICEYAR---SITLERPALLGRIIA--RP-----------TRHDYALSFAPTVLNKLADAGVSTYAVGKINDIFNGSGITNDMHNKSNSHGVDTLIKTMGSAFTGFSFTNLVDFDAYGHRRNAHGYRDCLHEFDERLPEIIAAMKVDDLLLITADHGNDPTYAGTDHTREYVPLLAYSPSFTGNVLPVG-HYADISATIADNFGVDTAMIGESFLDKLI------
6	HHPRED-g	3ot9_A	0.272	0.939	0.637	threading_6	YKRIFLVVMDSVGIGEAPDAEQ--FGDLGSDTIGHIAEHMNGLQMPNMVKLGLGNIREMKGISKVEKPLGYYTKMQEKSTGKD-MTGHWEIMGLYIDTP----FQVFPEGFPKELLDELEEK------TGRKIIGNKPASGTEILDELGQEQMETGSLIVYTSADSVLQIAAHEEVVPLDELYKICKIAR---ELTLDEKYMVGRVIA--RPFVGEPGNFTRTNRHDYALKPGRTVMNELKDSDYDVIAIGKISDIYDGEGVTESLRTKSNMDGMDKLVDTLNMDFTGLSFLNLVDFDAFGHRRDPQGYGEALQEYDARLPEVFAKLKEDDLLLITADHGNDPIHPGTDHTREYVPLLAYSPSMKEGELPLRQTFADIGATVAENFGVKMPEYGTSFLNEL-------
7	SP3	2i09a	0.265	0.897	8.482	threading_7	FNRIHLVVLDSVGIGAAPDANNFSVPDGASDTLGHISKTVG-LNVPNMAKIGLGNIPRDTPLKTVPHPTGYVTKLEEVSLGKDTMTGHWEIMGLNITEP----FDTFWNGFPEEIISKIEK-----------------FSGRKVIREANKPYSGTGELIIYTSADPVLQIAAHEDVIPLDELYRICEYARS---ITLERPALLGRIIAR--PTAN---------RHDYALSPAPTVLNKLADAGVSTYAVGKINDIFNGSGITNMGHNKSNSHGVDTLIKTMGLSTKGFSFTNLVDFDAYGHRRNAHGYRDCLHEFDERLPEIIAAMKVDDLLLITADHGNDPTYAGTDHTREYVPLLAYSPSFTGNGVLPVGHYADISATIADNFGVDTAMIGESFLDKLI------
8	SAM-T99	3m8wA	0.275	0.917	6.640	threading_8	YKRIFLVVMDSVGIGEAPDAE--QFGDLGSDTIGHIAEHMNGLQMPNMVKLGLGNIREMKGISKVEKPLGYYTKMQEKSTGKD-MTGHWEIMGLYIDTPFQVFPEGFPKELLDELEEKTGNKPASGTEILDELGQEQMETGLIVYTSADSVLQIAAHEEVVPLDELYKICKIARELYMVGRVIARPFVGEP------------------------GNFTRTPNRHDYALKPFGRTVMNELKDSDYDVIAIGKISDIYDGEGVTESLRTKSNMDGMDKLVDTLNMDFTGLSFLNLVDFDAFGHRRDPQGYGEALQEYDARLPEVFAKLKEDDLLLITADHGNDPIHPGTDHTREYVPLLAYSPSMKGQELPLRQTFADIGATVAENFGVKMPEYGTSFLNEL-------
9	MUSTER	2i09B	0.264	0.902	2.731	threading_9	FNRIHLVVLDSVGIGAAPDANNFGVPDGASDTLGHISKTVG-LNVPNMAKIGLGNIPPLKTVPAENHPTGYVTKLEEVSLGKDTMTGHWEIMGLNITEP----FDTFWNGFPEEIISKIEK-----------------FSGRKVIREANKPYSGTGELIIYTSADPVLQIAAHEDVIPLDELYRICEY---ARSITLERPALLGRIIAR--PYRTAN-------RHDYALSPFPTVLNKLADAGVSTYAVGKINDIFNGSGITNMGHNKSNSHGVDTLIKTMGAFTKGFSFTNLVDFDLYGHRRNAHGYRDCLHEFDERLPEIIAAMKVDDLLLITADHGNDPTYAGTDHTREYVPLLAYSPSFTGNGVLPVGHYADISATIADNFGVDTAMIGESFLDKLI------
10	SPARKS	1eqja	0.156	0.956	3.367	threading_10	-KKVALIILDGFALRDETYGNAVAQGQMGNSEVGHLNIGAGRIVYQSLTR--INIAIREGEFDRNETFLAAMNHVKQ--HGTSSDGGHLRLAGVKRVLDGRDVGPQTAPQYIKELQEKIKEVGEIATLSGRMVYGEGPKHGSVIVREDGRPTIQDNDAIIFYNPDRAIQISNTFTNEDFRE-FDRGPKHPKHLFFVCLTHFTVAGYVAFKPTTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAGGIAIITADHGNADEVPQTAHTTNPVPVIVTKKGIK---LRDGGILGDLAPTMLDLLGLPQPMTGKSLIV---------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.897 to 2i09B SCOP code=c.76.1.5	TM-score=0.896 to 2i09B SCOP code=c.76.1.5	TM-score=0.907 to 2i09B SCOP code=c.76.1.5	TM-score=0.857 to 2i09B SCOP code=c.76.1.5	TM-score=0.896 to 2i09B SCOP code=c.76.1.5