Template-based Modeling Results for YHFT_ECOLI

Submitted Primary Sequence

>Length 434
MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA
44111110000000000000012000011100210012002221223200000100000000201011114101110000000010000002321211010001011011001000300220101001001301110000000000000012101210000000000011001211331112000000000000000002313343323232201100221022014101100000000000010210121200010012122222223202210110000100200010000000000100100100000000011131110000000001001000021003102311103200210120011000000000000002410020000000000000210221012000000000000000100110001125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVDYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA
1	PROSPECT2	1jdha	0.125	0.959	1.947	threading_1	EDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSP-------VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAKLIILASGGPQALVNIMRTRVLKVLSVCSSNKPAIVEAGGMQALGNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLNKMMVCQVGGIEALVRTVLRAGDREDITEPAI--CALRHLTSRHQEAEMAQNAVRLHYGLPVV-------VKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTRMEEIVEGCTGALHILARDVHNRIVITIPLFVQLLYSPIENIQRVAAGVLCEGVATYAAAVLFRMS--
2	PPA-I	3g61A4	0.102	0.680	1.126	threading_2	---------------------------------------------------------------------------------------------GWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGARTVIAFKELERYNNNLEEAKRLGIKKAITANISMGAA----------FLLIYASYALAFWYGTSLVISKEYSLDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAF---SVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGI--ISFITFFLQGF---------------------TFGKAGEILTKRLRYMVFKSMLRQDVSWDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQN----IANLGTGIIISLIYFE---NVLLVFSAIVFGAMAVGQVS---SFAPD
3	PROSPECT2	1ejlI	0.085	0.917	1.837	threading_3	VEDIVKGIQLQATQAARKLLSREKDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLAS------PHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNAPPLDAVEQILPTLVRLL-----HHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVT--PALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPK------TNIQKEATWTMSNITAGRQDQIQQVVNHGLVPF------LVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGE---TEKLSIMIEECGGEALQRHENESVYKASLNLIEKYF--------S
4	PPA-I	3g61A1	0.100	0.760	1.065	threading_4	---------------------------------------------------------------VSVLTMFRYAGWLDRLYMLVGTL---------AAIIHGVALPLMMLIFGDMTDSFASV---GNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLA----AGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYE---VFKIIDNKPSIDSFSGW--------------------QLTLLLLAIVPIIAIAGVVEMKM--LSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGA
5	PROSPECT2	1ee4a	0.110	0.882	1.817	threading_5	QELPQMQEQLSATVKFRQILSREHDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYT------GSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPDWSVVSQALPTLAKL--------IYSMDTETLVDACWAISYLSDGP-----------------QEAIQAVIDVRIPKRLVELTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLPKENIKKEACWTISNITAGNTEQIQAVIDANLIPP------LVKLLEVAEDKTKKEACWAISNASSGGLPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLILKMGEADKEARGLNINENADGMEKIFNCQQNENDK-----IYEKAYKIIETY---------F
6	PPA-I	1ialA	0.099	0.903	1.026	threading_6	----------------DEQMLKRRNVSNQGTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQNIIRAGLIPKFVSFLGK------TDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLA-----CGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHND----PEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGLPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVF-------PSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLS----AKDTKIIQVILDAISNIFQAAEKLGET
7	PROSPECT2	1b3ua	0.092	0.972	1.814	threading_7	SLYPIAVLILNSIKKLSTIALALGVERTRSELLPLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDLFSVCYPRVSSAVKAELRQYFRRRAAASKLGEFAKVLEVEACVNIAQLLPQEDLEALVMPTLRQAAEDKVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPA------------IVELAEDAKWRVRLAIIEYMPLLEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPTTLFCINVLSEVCGQDITTKHMLPTVLRMAGFNVAKSLQKIGPILDA
8	PROSPECT2	3a6pA1	0.102	0.952	1.733	threading_8	AMDQVNALCEQLVKAVTVMMDPNSFKEKCPICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNMSRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKRELIELDTLSKQGETQTELVMFILLRLAEDVVQRRRDIQQTLTQNMERIFSFLLNTLQENVYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVKPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALG---NQLCALLGADSDVE------------TPSNFGKYLESFLAFTLRSSTQMTWGALFRHEILSRD--PLLLAIIPKYLRASMTNPSCEYSRFDFDSDEDFNAFFNSSRAQQG--EVMRLACRLDPKTSFQMAGEWLKYQ--LSTF
9	MUSTER	1pw4A	0.167	0.855	0.784	threading_9	IDPTWQIFLGIFFGYAAYYLVRKNFALA-------MPYLVEG-FSRGDLGFALSGISIAYGFS-NPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWSQKGIVSVWNCAHNVGGGIPPLLFLLGMAWFDWH-LYMPAFCAILVALFAFAMMRD-TPQ----------------SCGLPPIEEYKNDTA----KQIFMQYVLPNKLLWYIAIANVFVYLLRYGIL-DWSPTYLKE---VKHFALDKSSWAYFLYEYAGIPGTLGWM-RGATGVFFMTLVTIATIVYWM---NPAGNPMICMIVIGFLIYGPVMLIGLHALEL--AP---------KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF---------G--WDGGFMVMIGGSILAVILLIVVMIG-LVP-
10	SPARKS	2bkub	0.101	0.917	0.772	threading_10	DNWRNREAAVMAFGSIMDGPDKVQRTYY---VHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQ---DHPKVATNCSWTIINLVEQLAYNFYPALVDGL-IGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPV--ADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKETFSPYLLKALN---QVDSPVSITAVGFIADISNSLEYSDAMMNVLAQM---------------ISNPNPAVLSVFGDIASNIGADFIPYLNDIMALCNGTLEALDYQIKVLEAVLDAYVGIVAGLHPEALFPY----VGTIFQFIAQVAEDPTSRAAVGLIGDIAAGSIKQFYG-----QDW

Predicted Tertiary Structure


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TM-score=0.840 to 1kpkA SCOP code=f.20.1.1	TM-score=0.618 to 1xm9A SCOP code=a.118.1.24	TM-score=0.393 to 1jqnA SCOP code=c.1.12.3	TM-score=0.583 to 2q6hA SCOP code=f.54.1.1	TM-score=0.880 to 1ialA SCOP code=a.118.1.1