Template-based Modeling Results for YHEO_ECOLI

Submitted Primary Sequence

>Length 240
MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK
CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCCEECCCCCEEEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK
554312233222111223331332012003001100200020012201000000432400001001020112321120111002002222223220021112204332101000000225432000000000201110120012103332232222232221132002200210022131233112321122001102521012032002100420400110012003203423242444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK
1	PROSPECT2	3qp6A	0.115	0.796	1.147	threading_1	INARPLPAGLTASQQ-------WTLLEWIHMAGELKAFLDNILSQAIILVLGRLNNQNQIQKVLNVSYLGQGRAKGSEEKRFIAEASSNGMGS------------------GITFSAASDRNNVGSILSIGGKEPGRNAALVAML------------------NCLTPHLHQAAVRIANLPPASPSNQREYDIFHWM-SRG-----KTNWEIATILNISERTVKFHVANVIRKTPRELVN
2	HHPRED-g	1jko_C	0.261	0.192	1.068	threading_2	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRPRA-INK-HEQEQISRLLEKGH-----PRQQLAIIFGIGVSTLYRYFPASS---------
3	PROSPECT2	1booa	0.103	0.929	1.117	threading_3	NFGKKPAGDSLELLESKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD-----------FGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAEDFYWFNPSKLPSPIEWVNKRKIRVKDAVNTVWWFSKTEWPKSDITK----VLASIPPNLLQISNSESNGQYLANCKL--MGIKAHPARFPAKLPEFFIRMLTEPDIFGGSNTTGLVAERESISEEKITDIYNRILNGESDLNSI
4	PROSPECT2	2q0oA	0.089	0.796	1.116	threading_4	------SVNGNLRSLIDMLEAAQDGHMIKIALRSFAHSC-----GYDRFAYLQKDGTQVRTFHFWTADAWPARGSSPLRRFRDEAISHG--------------------IRCGVTIPVEGSYGSAMMLTFASP------------ERKVDISGVLDPKKAVQLLMMVHYQLKIIAAKTVLNPKQMLSPREMLCLVWA-SKG-----KTASVTANLTGINARTVQHYLDKARAIAKDRGLV
5	PROSPECT2	1f0ka	0.093	0.983	1.096	threading_5	IRISGLRGKGIKALIAAPLRIFNAWRQARAIMKGPGGLAAWSLGIPVVLHEQNGIAKIATKVMQAFPGAFPNAVGNPVRTDVLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAE----AGQPQHKVTEFIDDMAAAYAWLTVSEIAAAGLPPFQHKDRQQYWNALPLEKAGAAKIQLSVDAVANTLGWSRETLLTMAERARAASIPDRAL
6	PROSPECT2	3sztA	0.110	0.871	1.066	threading_6	REG-----------YLEILSRITTEEEFFSLVLEICGNYG---FEFFSFGARAPFPLTAPKYHFLSNYPGEISEDYTSIDPIVRHGLLEYGEDFQENRFFWEEALHHGIRHGWSIPVRGKYGLISMLSLVRSSESIAATEILEKE-----------SFLLWITSMLQATFGDLLAPRIVPESNVRLTARETEMLKWT-AVG-----KTYGEIGLILSIDQRTVKFHIVNAMRKYAIGLLN
7	MUSTER	1ykdA	0.126	0.992	0.755	threading_7	VTE-VEQKLQIVHQTLSMLDSHGFENILQEMLQSITLKTGELLGDRTTIFLLD-EEKQELWSIVAAGELEIRPADKGIAGEVATFIPFDFYHDPRSIFAQKQEKITGYRTYMLALPLLSEQGRLVAVVQLLNKLKPYSPPDALLAERIDNQGFTSAEQLFQEFAPSIRLILESSRSFYIATQKQRAAAAMMKAVKSLSQSSLDLLKRVMDEAKELMNADRSTLWLIDRDTKITQDNGSTK
8	SPARKS	3cloa	0.129	0.875	0.839	threading_8	--GDVLQKEIDEVYATHPTAHEALDNGIVEQHQQFVRSLTEV--NGGCAVISDLSNRKSYVTALSVIDSDEDCIYRRIHPEDLVEKRLEERLKYRGRCRLRNEKGVYQYIDNLVQIQNTPAGNVWLIFCLY----------------SLSADQRPEQGIYATITQERGEVETLSLSEEHRNI--LS-EREKEILRCIR-KGL-----SSKEIAATLYISVNTVNRHRQNILEK-LSVGNS
9	PROSPECT2	2fnaA	0.092	0.954	1.053	threading_9	GLFDTSPKDNRKRKFEERNYISYKD--FLLELQKEINKLVKRLPS----LLKALKNIQGIV-----IGNEIKFNRLSFANLLESFEQASKLRGVNLLPALAYAYDNLKRIKFISGSEGPLFGRAFSTVELKPFSREEAIEFLRRGFQEADIDFKDYELDNKNLDFAINQTLEYAKKLILKEFENFLHGREIARKRYLNIRTLSKCGKWSDVKRALEEISDSEIYNYLTQLTKHSKEGEKS
10	PPA-I	1ykdA1	0.100	0.833	0.929	threading_10	-VTEVEQKLQIVHQTLSMLDSHGFENILQEMLQSITLKTGELLGDRTTIFLLDEEKQELWSIVAAGEGDRSLEIDKGIAGEVATFIPFDFYHDPRSIFAQKQEKITGYRTYMLALPLLSEQGRLVAVVQLLNKLKPYSP------PDALLAERIDNQGFTSADEQLFQEFAPSIRLILESSRSFYIATQKQRAAAAMMK--------AVKSLSQS-------------------------

Predicted Tertiary Structure


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TM-score=0.468 to 2oolA SCOP code=d.110.2.1	TM-score=0.441 to 1hcrA SCOP code=a.4.1.2	TM-score=0.737 to 1booA SCOP code=c.66.1.11	TM-score=0.432 to 1f5mB SCOP code=d.110.2.1	TM-score=0.697 to 1f0kA SCOP code=c.87.1.2