Template-based Modeling Results for YHDY_ECOLI


  Submitted Primary Sequence

>Length 367
MTKVLLSHPPRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRGRYIAAWAVIYPLIVWWLMYGGFFALERVETRQWGGLTLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGRTPH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKVLLSHPPRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRGRYIAAWAVIYPLIVWWLMYGGFFALERVETRQWGGLTLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGRTPH
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKVLLSHPPRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRGRYIAAWAVIYPLIVWWLMYGGFFALERVETRQWGGLTLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGRTPH
5542222223220133212000100410111101000100000000110010010000102111111200241000000004201100001013221000000000000000000032122201100000000000000110000000120012101000000000000000000000000002203120020001000100210110000000000001011310201300000000000000000100200031014001100210211112010000001002200100022001101100000000011001002201121221011010000000000000000120020014213224335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTKVLLSHPPRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRGRYIAAWAVIYPLIVWWLMYGGFFALERVETRQWGGLTLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGRTPH
1MUSTER3dhwA0.1630.5341.538threading_1-------------------------------------------------------------------------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVI---VGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYI---GYNATVMNTVLVLLVILVYLIQFAGD--------------
2PROSPECT21ejlI0.1420.9591.824threading_2GTVNWREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIAIPAFISWALGNIAGDGSAFRDLVIKHGAIDPLLALLA-----VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLL-----HHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNQDQIQQVVNHGLGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQVYKASLNLIEKY-----FS
3PROSPECT21ee4a0.0790.8991.733threading_3QE------------------LPQMTQQLNSDDMQEQLSATVKFRQIL------------SREHRPPIDVVIQAGVVPRLVE-----FMRENQPEMLQLEAAWALTNIAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGPSLIRTATWTLSNLCWSVVSQALPTLAKLIYSETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELSHESTLVQTPALRAVGNIVTGNDLQTQVVIN--AGVLPALRLLLSSPKENIKKEACWEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCEVTLDALENILKMGEADKEARGLNI
4HHPRED-l3rlf_F0.1390.8263.778threading_4---------------WQSDALKWSVLGAQGEYLFAITTLILSSAGLYINRKAYAWAFTNYTNQLTFERAQEQAGKTYNFALSDGEKNYLGFY----NWGDEK-------------LSPGYT--V----TTGWKNFTR-V-F-TD----EGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQEALRG-KAVYRVLLILPYAVPSFISILIFKGLFNMMLSFGVKPDPRTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNPDLLVTYRIAFEGG--GGQDFGLAAAIATLIFLLVGALAI----------------
5SPARKS3dhwa0.1580.5346.125threading_5-------------------------------------------------------------------------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVI---VGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYI---GYNA-TVMNTVLVLLVILVYLIQFAGD-------------
6PROSPECT23a6pA10.0700.9731.722threading_6AMDQVNADPNSTQRYEKCPICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFVMELIANGTLILEEENHIKDALSRIVVEMIKREWP---QHWPSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQESKAQANCRVGVAALNTLAGLEILCLLLNEQELQLGAAECLLIAVSRKVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETSFLAFTTHPSQFLRSSTQMDPLLLAIIPKYLRASMTNLSKTDSPSCEYSRFDFDSDEDFNAF-------FNSSRAQQGEVMRLACRLKTSFQMAGEWLKYQLSTF
7PROSPECT23dhwA0.1680.5342.490threading_7M-------------------------------------------------------------------------------------------------------------------------------------------------------WLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVI---VGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIG---YNATVMNTVLVLLVILVYLIQFA--------------GD
8SAM-T992q2aA0.0820.4311.103threading_8ITDERKQSYDFSDPYFEATQVILVKQGSALDLKGKTIGVQNATTGQEAAEKLFGGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQVIEDPKNFASEYYGMIFPKNSELKAKVDEALKNVI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSG---KYTEIYK-----------------KWFGKEPKLDRLKQ
9PPA-I3dhwA0.1630.5343.974threading_9-------------------------------------------------------------------------------------------------------------------------------------------------------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIG---LQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYI---GYNATVMNTVLVLLVILVYLIQFAGD--------------
10HHPRED-l3tui_A0.1720.5694.194threading_10--------------------------------------------------------------------------------------------------------------------------------------------------MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLRIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIV--GTS-IGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYI---G-YNATVMNTVLVLLVILVYLIQFAGDRIVRAVTR-----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.730 to 3dhwA
SCOP code=f.58.1.1
TM-score=0.826 to 1ialA
SCOP code=a.118.1.1
TM-score=0.738 to 3dhwA
SCOP code=f.58.1.1
TM-score=0.727 to 1ialA
SCOP code=a.118.1.1
TM-score=0.639 to 2onkC
SCOP code=f.58.1.1