Template-based Modeling Results for YHDW_ECOLI

Submitted Primary Sequence

>Length 341
MKKMMIATLAAASVLLAVANQAXAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKMMIATLAAASVLLAVANQAXAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEEECCCCCCCCEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKMMIATLAAASVLLAVANQAXAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR
42200100000000000001221221102102531101000231111000114312010000100200023022341202002011421120022130000011011122111111111100000100000022422132032034120002111212100121143332311001023032002103212000000010100001131323221100331124110000022123300200120021013133111002201320132213300200223122022040222000100210010010022102230303032021101121001101324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKMMIATLAAASVLLAVANQAXAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR
1	SPARKS	2vhaa	0.067	0.792	4.288	threading_1	--------------------APAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAFSD--TIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSG---EAEKWFDKWFKNPIPPKNLNMFELSDEMKALFKEPNDKAL----------------------------------------------
2	PROSPECT2	1xt8A	0.226	0.727	3.411	threading_2	L------------------------NSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--QVDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAYF----TQNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKD--HPDFKMGIKELGNKDVIAPAVKKGDKELKEFIDNLIIKLGQE--------------------------------------------------QFFHKAYDETLKAHFGDDVKA--DDVVIEG---------
3	PPA-I	1xt8B	0.064	0.730	4.345	threading_3	---------------------STLNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQVDFCSPY--MKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAYFTQNYP----NIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKD--HPDFKMGIKELGNKDVIAPAVKKGDKELKEFIDNLIIKLGQEQ---FFHKAYDETLKAHFGDDVKDDVVIEG------------------------------------------------------------
4	HHPRED-l	1xt8_A	0.230	0.716	3.318	threading_4	------------------------LNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQ--VDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAYFT----QNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKDHP--DFKMGIKELGNKDVIAPAVKKGDKELKEFIDNLIIKL--------------------------------------------------GQEQFFHKAYDAHFGDDVKA------DDVVIEG---------
5	HHPRED-g	1xt8_A	0.236	0.721	2.981	threading_5	------------------------LNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAE--QVDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTAD----AYFTQNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKD--HPDFKMGIKELGNKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFF---HKAYDETLKAGDDVKADDVVIEG------------------------------------------------------------
6	SP3	2vhaa	0.067	0.792	4.230	threading_6	--------------------APAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAFSD--TIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSG---EAEKWFDKWFKNPIPPKNLNMFELSDEMKALFKEPNDKAL----------------------------------------------
7	SAM-T99	1xt8B	0.237	0.680	4.321	threading_7	-------------------------NSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQ--VDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAYFTQNY----PNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVK--DHPDFKMGIKELGNKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFF---HKAYDETLKA-------------------------------------------------------------------------
8	SPARKS	1xt8a	0.223	0.724	3.811	threading_8	------------------------LNSLDKIKQNGVVRIGVFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDIILANFTQTPQRAEQVDFCS--PYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAYFTQN----YPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKD--HPDFKMGIKELGNKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFFHKAYDTLKAHFGDDVKADD---VVIEG-----------------------------------------------------------
9	PROSPECT2	2v25A	0.226	0.674	3.332	threading_9	-------------------------GKLESIKSKGQLIVGVKNDVPHYALLQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKR--IYNFSEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFAKYVDDFVKEHK----------------------------------------------------NEIDALAKK---------------------------WGL
10	PPA-I	2v25A	0.239	0.674	4.290	threading_10	-------------------------GKLESIKSKGQLIVGVKNDVPHYALLDATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDAVIATFTITPERKRIYN--FSEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYV-----DDKSEILPDSFEPQSYGIVTKKDDPAFAKYVDDFVKEHKN--EIDALAKKWGL-----------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.860 to 1xt8B SCOP code=c.94.1.1	TM-score=0.780 to 1xt8B SCOP code=c.94.1.1	TM-score=0.851 to 1xt8B SCOP code=c.94.1.1	TM-score=0.849 to 1xt8B SCOP code=c.94.1.1	TM-score=0.847 to 1xt8B SCOP code=c.94.1.1