Template-based Modeling Results for YHDE_ECOLI

Submitted Primary Sequence

>Length 197
MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG
CCCEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEEEECCEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG
54200001102202200230302010000203233334320320012002210110013114310000000000021100220421320030024013311100000000223201200110201023013310200021321112000000211000002102011200110000100200230302333434455
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG
1	MUSTER	1excA	0.462	0.934	4.221	threading_1	MKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADL-HPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHF------------
2	SPARKS	1ex2a	0.457	0.934	5.990	threading_2	TKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADL-HPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHF------------
3	PROSPECT2	2p5xA	0.380	0.949	4.275	threading_3	LKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKFATPYGYAMETAKQKALEVANRLRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYY----------
4	PPA-I	1excA	0.457	0.934	7.759	threading_4	TKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADL-HPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHF------------
5	HHPRED-l	2p5x_A	0.385	0.949	7.518	threading_5	HKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASTPYGYAMETAKQKALEVANRLRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHHQLVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYY----------
6	HHPRED-g	2p5x_A	0.385	0.949	6.528	threading_6	HKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASTPYGYAMETAKQKALEVANRLRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHHQLVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYY----------
7	SP3	1ex2a	0.457	0.934	5.730	threading_7	TKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADL-HPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHF------------
8	SAM-T99	1excA	0.459	0.929	7.320	threading_8	-KPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADL-HPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHF------------
9	MUSTER	2amhA	0.200	0.939	3.787	threading_9	IRTMIIGTSSAFRANVLREHFRNFVLLPPDIDEKAYRAADPFELTESIARAKMKAVLEKARQPAIALTFDQVVVKGDEVREKPLSTEQCRSFIASYSGGGVRTVATYALCVTENVLVAHNETETFFSKFGDDIVERTLERGACMNSAGGLVVEDEDMRHVVRIVGTSYGVRGMEPAVVEKLLSQL------------
10	SPARKS	2p5xa	0.380	0.949	5.633	threading_10	HKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASTPYGYAMETAKQKALEVANRLYAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYY----------

Predicted Tertiary Structure


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TM-score=0.961 to 1excA SCOP code=c.51.4.2	TM-score=0.962 to 1excA SCOP code=c.51.4.2	TM-score=0.936 to 1excA SCOP code=c.51.4.2	TM-score=0.893 to 1excA SCOP code=c.51.4.2	TM-score=0.963 to 1excA SCOP code=c.51.4.2