Template-based Modeling Results for YHCG_ECOLI

Submitted Primary Sequence

>Length 375
MESLSEGTTAGYQQIHDGIIHLVDSARTETVRSVNALMTATYQEIGRRIVEFEQGGEARAAYGAQLIKRLSKDLCLRYKRGFSAKNLRQMRLFYLFFQHVEIHQTMSGELTPLGIPQTPSAEFPSAKIWQTLSAKSFPLPRSTYVRLLSVKNADARSFYEKETLRCGWSVRQLERQIATQFYERTLLSHDKSAMLQQHAPAETHILPQQAIRDPFVLEFLELKDEYSESDFEEALINHLMDFMLELGDDFAFVGRQRRLRIDDNWFRVDLLFFHRRLRCLLIVDLKVGKFSYSDAGQMNMYLNYAKEHWTLPDENPPIGLVLCAEKGAGEAHYALAGLPNTVLASEYKMQLPDEKRLADELVRTQAVLEEGYRRR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MESLSEGTTAGYQQIHDGIIHLVDSARTETVRSVNALMTATYQEIGRRIVEFEQGGEARAAYGAQLIKRLSKDLCLRYKRGFSAKNLRQMRLFYLFFQHVEIHQTMSGELTPLGIPQTPSAEFPSAKIWQTLSAKSFPLPRSTYVRLLSVKNADARSFYEKETLRCGWSVRQLERQIATQFYERTLLSHDKSAMLQQHAPAETHILPQQAIRDPFVLEFLELKDEYSESDFEEALINHLMDFMLELGDDFAFVGRQRRLRIDDNWFRVDLLFFHRRLRCLLIVDLKVGKFSYSDAGQMNMYLNYAKEHWTLPDENPPIGLVLCAEKGAGEAHYALAGLPNTVLASEYKMQLPDEKRLADELVRTQAVLEEGYRRR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHCHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEHHHCCCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MESLSEGTTAGYQQIHDGIIHLVDSARTETVRSVNALMTATYQEIGRRIVEFEQGGEARAAYGAQLIKRLSKDLCLRYKRGFSAKNLRQMRLFYLFFQHVEIHQTMSGELTPLGIPQTPSAEFPSAKIWQTLSAKSFPLPRSTYVRLLSVKNADARSFYEKETLRCGWSVRQLERQIATQFYERTLLSHDKSAMLQQHAPAETHILPQQAIRDPFVLEFLELKDEYSESDFEEALINHLMDFMLELGDDFAFVGRQRRLRIDDNWFRVDLLFFHRRLRCLLIVDLKVGKFSYSDAGQMNMYLNYAKEHWTLPDENPPIGLVLCAEKGAGEAHYALAGLPNTVLASEYKMQLPDEKRLADELVRTQAVLEEGYRRR
553233222210220030013002201120031001100100120021002122123211210220022002101331432011300200110021023231122100212322123222231222201200123112022000011110322301110021012201112101210022112212123222210233132323211320020100020031433212110120002101200030222000101111020341201000000001030000010211412220001011001002211222332120000002332222010012113320100103022323330231023022113222445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MESLSEGTTAGYQQIHDGIIHLVDSARTETVRSVNALMTATYQEIGRRIVEFEQGGEARAAYGAQLIKRLSKDLCLRYKRGFSAKNLRQMRLFYLFFQHVEIHQTMSGELTPLGIPQTPSAEFPSAKIWQTLSAKSFPLPRSTYVRLLSVKNADARSFYEKETLRCGWSVRQLERQIATQFYERTLLSHDKSAMLQQHAPAETHILPQQAIRDPFVLEFLELKDEYSESDFEEALINHLMDFMLELGDDFAFVGRQRRLRIDDNWFRVDLLFFHRRLRCLLIVDLKVGKFSYSDAGQMNMYLNYAKEHWTLPDENPPIGLVLCAEKGAGEAHYALAGLPNTVLASEYKMQLPDEKRLADELVRTQAVLEEGYRRR
1	PROSPECT2	3a6pA1	0.053	0.949	1.478	threading_1	AMDQVNALCEQLVKAVTVMLKFCEEFKEKFGLQILEHVVKFRWNMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQEL-------QLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRCQVLCALGNQLCAL-----LGADSDVETPSNFGKYLESFLAFTTHPSGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGFPSK-------TDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLAQMAGEWLKYQLSTF
2	HHPRED-l	2vld_A	0.152	0.560	4.782	threading_2	---------------------------------------------RKIIK---ENP---------SEEEIK---------ELLDLAEKHVVTIFARCK-VHYEGRAKSELGPDGSFLIHQNKKREPVNWQPPGSK-------VTF-----K--------------EN------------S-I---SIRRRPYERLEVEIIEPYSL-------VVFLADYEE-----SEAE-ANLIFENPRV----IEEGFKPIYREKPIRHG----IVDV-GVDKD-GNIVVLELKRRKADLHAVSQ-KRYVDSLKEEY----GENVRGILVAPSLTEGAKKL-LEK----EGLEFRKLEPP-----------------------
3	HHPRED-g	2vld_A	0.135	0.555	3.466	threading_3	------------------------------------------------------------------------------------------RKVIIENPSEEIKELLDLAEKHGGVV-TIFARCKVHY----EGRAKSELGEGDRIIIIKPDGSFL----IHQREPVNWQPPKVTF-KENS-I---SIRRRPYERLEVEIIEPYSLVVFLAE------DYEE-----SEAE-ANLIFENPRV----IEEGFKPIYREKPIRHG----IVDV-GVDKD-GNIVVLELKRRKADLHAVSQ-KRYVDSLKEEY----GENVRGILVAPSLTEGALEFRKLEPP------------------------------------
4	PROSPECT2	1m5ya	0.077	0.896	1.436	threading_4	VDKVGVVLESDVDGLMQSVKLNAAQADATLRHQIMERLIMD--QIILQMGQKMGVKISDEQLDQAIANIAKQ-------NNMTLDQMRSRLA-YDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVTELNLSHILIPLPENPTSDQVNE------------AESQARAIVDQARNGADFGKLAIAHSADQQ------ALNGGQMGWGR-----------IQELPGIFAQALSTAKKGDIVGPIRSGHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEAAAAKEFSQDPGSANQGGDLATPDIFDPAFRDALTRLNKGIELLDTRNVDRAYRMLMNRKEEAASWMQEQRASS
5	PROSPECT2	1gw5b	0.116	0.944	1.410	threading_5	SKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVLKKLVYLYLMNYAKSQPDMAIMAVNSFEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSSESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDAPPLVTLLSGEPEVQYVALRKQEIKVFFVKYNDPIYVKLEKLDIAQVLAELKEYATE------------VDVDFVRKAVRAIGRCAI---------KVEQSAERCVSTLLDLIQTFRKYPNKYESIIATLCEAERIDNADELLESFLEGFHDESTQVPSETQELVQQVLSIEPTLLDELICHV
6	PROSPECT2	1jdha	0.088	0.995	1.407	threading_6	TKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTKVLSVCSSNKPAIVEAGGMQATDPSQRLVQNCLWTLRNLSDAATKQLGTLVQLLGSDDINVVTCAAG--ILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKIPRLVQLLVRAHQDTQFVEGVRMELLYSPIENIQRVALCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAS
7	PROSPECT2	1ejlI	0.065	0.941	1.407	threading_7	VKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRKFVSFCSPIQFESAWTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYL--TDGPNERIEMVVKKGVVPQLVKLLGATAIGNIVTGTDEQTQKVIDAGALAVFPSLMSNITAGRQ-----------------DQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYVEQIVYLVHCGIIEPLLLSAKDTKIIQVILDAISN---IFQAAEKLGETEKLSIMIEECLDKIEALQRHE
8	MUSTER	3v71A	0.107	0.851	0.728	threading_8	EANYPLDSE---DQIRKAVFEKFTESTTLFVGLCHS-------RNGNFIVQKLVELATPAEQRELLRQMIDGGLLAMCKDKFACRVVQLALQKF----DHSNVFQLIQELSTFDLAAMCTDQI-SIHVIQRVVKQLPVDMWTFFVHFLSSGD------SLMAVCQDKYGCRLVQQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLSSNNYVIQYVIKSSGIMEMYRDTIIDKCLLRNLLSMSQDYA-----------------SHVIEGAFLFA--------------PPALLHEMMEEIFSVKDVESNRDALDILLFHQYGNYVVQQMISICTAALI----ELPPAILLLYSGWYEKMKQRVLQHASRR
9	SPARKS	1txda	0.100	0.853	0.869	threading_9	SREVLLGLKPCEIKRQEVINELFYTERAHVRTLKVLDQ--------VFYQRVSREG---------ILS--PSELRKIFS------NLEDILQLHIGL-----NEQMKAVRKRNETSVIDQIFSGPGEEKLKHAAATFCSNQPFALEMIKSKDSRFQTFVQDAESNPLCRRLQLKDII-PTQMQRLT---KYPLLLDNIAKYTEWPTEREKVK--KAADHCQILNFVNQAVKEAENKQRLEDYQRRLDTKRKMIHEGPLVWKVNRDKTIDLYTL---LLEDILVLLQKQDDRLVLRCTFSPVIKLSTVLVRQVATNKALFVISMSDNG----------------AQIYELVAQTVSEKTVWQDLICRMAASVKEQS
10	PROSPECT2	1txdA	0.083	0.864	1.363	threading_10	SREVLLGLKPCEIKRQEVINELFYTERARTLKVLDQVFYQRVSREGSELRKIFSNLEDILQLHIGLNEQMKAVRKRNETSVISGPGEEKLKHAAATF-----CSNQPFALEMIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDI-----IPTQMQRLTKYPDNIAKYTEWPTEREKVKKAADHCRQILNFVNQAVKEA------ENKQRLEDYQRRLDTSSLVEELRNLDLTK--------------RKMIHEGPLVWKVNRDKTIDLYTLLLE---DILVLLQKQDDRLVLRCTFSPVIKLSTV---LVRQVATNKALFVISMSDNGAQ---------------IYELVAQTVSEKTVWQDLICRMAASVKEQS

Predicted Tertiary Structure


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TM-score=0.561 to 3ea5B SCOP code=a.118.1.1	TM-score=0.466 to 1y88A SCOP code=a.60.4.3	TM-score=0.417 to 1y88A SCOP code=a.60.4.3	TM-score=0.595 to 1m5yD SCOP code=a.223.1.2	TM-score=0.508 to 2vglB SCOP code=i.23.1.1