Template-based Modeling Results for YHCC_ECOLI

Submitted Primary Sequence

>Length 309
MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE
CCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE
553321111001000431332001000101010112212103110100111111232321320121012002113312210000221012103131021002201322311100010123112320020013133311100010012112330032023112021023002103421020000000101221222002002200401120020000001310210111322313113131002000200310232000000011033310000211331110011012103323130222222223334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE
1	MUSTER	1oltA1	0.181	0.896	1.243	threading_1	LEFSEGEQAFLQAVAR-YPERPLSLYVHIPF-CHKL--------CYFCGCNKIVTRQQHKDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFAEISIEVDPREIELDVLDHLRAEGFN----RLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNY-AHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQGYQFIGMDHFARPDD-----------ELAVAQREGVLHRNFQG------TTQGDT
2	SPARKS	1olta	0.176	0.903	3.012	threading_2	FSEDFGEQAFLQAV-ARYPERPLSLYVHIPF-CHKL--------CYFCGCNKIVTRQQHLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFAEISIEVDPREIELDVLDHLRAEGFN----RLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTI-FAAQRKIKDADLPSPQQKLDILQETIAFL-TQSGYQFIGMD---------HFARPDDELAVAQREGVLHRNFQG-----YTTQGDT
3	PROSPECT2	1tv7A	0.105	0.890	1.853	threading_3	EQIKDK-----------LGRPIRDLRLSVTDRCNFR--------CDYCMPKEVFGDDFVFLTFDEMARIAKVYAELGVKKIRITGGEPLMRRD---LDVLIAKLNQIDGIEDIGLTT-NGLLLKKHGQKLYDAGLR----RINVSLDAIDDTLFQSINRNIKATTILEQIDYATSIGLNVKVNVVIQ-KGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGW------DFSKVVTKDEMLTMIEQHFEIFGEVAKYYRHKDNGVQFGLITSVSQVTDEELKEQFKALWQIRDDRYSDETAQTVANRQ
4	PPA-I	1oltA1	0.176	0.900	1.559	threading_4	FSEDFGEQAFLQAVAR-YPERPLSLYVHIPFC---------HKLCYFCGCNKIVTRQQHLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFAEISIEVDPREIELDVLDHLRAEGFN----RLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNY-AHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQGYQFIGMDHFARPDD-----------ELAVAQREGVLHRNFQGY-----TTQGDT
5	HHPRED-l	1olt_A	0.162	0.942	5.370	threading_5	--FSEGEQAFLQAVARYPE-RPLSLYVHIPF-CHKL--------CYFCGCNKIVTRQQKAQYLDALEQEIVHRFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQDAEISIEVDPREIELDVLDHLRAEG----FNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQ-RKIKDADLPSPQQKLDILQETIAFLTQSGYQHRFQGQGDTDLLIGDCYAQNQKELKRDVIKSLCNFRLDYSPIEQQWDLLF-
6	HHPRED-g	2qgq_A	0.165	0.764	3.653	threading_6	-------------------EERPYAYVKISDGC---------------------GS-LRSRSIEDITREVEDLLKEGKKEIILAQDTTS-YGDKQALPDLLRRLNSLNGEFWIRV-LHPDHLTEEIISA-LELDK-VV-KYFDVPVQHGSDKILKL-GRTKSSEELKK-LSSIREPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSD-------------KVDPE-AKRRQEELLLLQAEKKLKFLVEGKEG----KFLVGRTWTEAP-----EVDGVVFVRGK--GKIGDFLEVVDE
7	SP3	1olta	0.188	0.948	3.065	threading_7	FSEDFGEQAFLQAVAR-YPERPLSLYVHIPF-CHKL--------CYFCGCNKIVTRQQHLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFAEISIEVDPREIELDVLDHLRAEGFN----RLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTI-FAAQRKIKDADLPSPQQKLDILQETIAFL-TQSGYQFIGMDRPDDELAVAQREQGYTTQGDTLKQYYQQVDEQGNALWRGIALTRD
8	SAM-T99	1oltA1	0.218	0.741	2.891	threading_8	---------------ARYPERPLSLYVHIPF-CHKL--------CYFCGCNKIVTRADQYLDALEQEIVHRALFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQDAEISIEVDPREIELDVLDHLRAEG----FNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVF---------------------------------NYAHLPTIFAAQRKIKDADLPS------PQQKLDILQETIAFLTQSGYQ-------------
9	MUSTER	1r30B	0.179	0.867	1.005	threading_9	KPLLDLLFEAQQVHRQHFPRQVQVSTLLSIKTCPE--------DCKYCPQSSRYKEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHEDMPYLEQMVQGVKAMG--LEACMT--LGTLSESQAQRLANAGLDYYNHNLD-----TSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVG-LGETVKDRAGLLLQLANLPPESVPINMLVKVKGTPL------ADNDDVDAFDFIRTIAVARIMMPT--SYVRLSAG----------REQMNEQTQAMCFMA-----YGCKLLTTPNPEEDK
10	SPARKS	1r30a	0.155	0.896	2.026	threading_10	KPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIK-----TGACPEDCKYCPQSKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERMPYLEQMVQGVKA----MGLEACMTLGTLSESQAQRLANAGLDYYNHNLD-----TSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVG-LGETVKDRAGLLLQLANLPPESVPINMLVKVKGTPLA------DNDDVDAFDFIRTIAVARIMMPT--SYVRLSAGREQSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQT---------

Predicted Tertiary Structure


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TM-score=0.807 to 1oltA SCOP code=c.1.28.2	TM-score=0.814 to 1oltA SCOP code=c.1.28.2	TM-score=0.826 to 1oltA SCOP code=c.1.28.2	TM-score=0.675 to 1tv8A SCOP code=c.1.28.3	TM-score=0.812 to 1oltA SCOP code=c.1.28.2