Template-based Modeling Results for YHCA_ECOLI

Submitted Primary Sequence

>Length 224
MLRHITFTVFITTSMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKRVTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLPEERETWKFLEWRKNGDQIEISNPSNYVVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALTNATDTKVEFYPASRYGYRGNKYVTDLK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLRHITFTVFITTSMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKRVTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLPEERETWKFLEWRKNGDQIEISNPSNYVVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALTNATDTKVEFYPASRYGYRGNKYVTDLK
CHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEECCCEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCHHHCCEEEEECCEEEEECCCCCEEEEEHHEEECCCCCEECCCCCEECCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLRHITFTVFITTSMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKRVTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLPEERETWKFLEWRKNGDQIEISNPSNYVVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALTNATDTKVEFYPASRYGYRGNKYVTDLK
32110000000000000011000021000003444210101021344320000000022333343130000110020233422101001223132321100100022022434432200000100010001022133333223212022223201021212100100200221332322113221000312120203323322010000012123132121225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLRHITFTVFITTSMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKRVTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLPEERETWKFLEWRKNGDQIEISNPSNYVVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALTNATDTKVEFYPASRYGYRGNKYVTDLK
1	MUSTER	3q48A	0.190	0.844	3.021	threading_1	----------------------IAQGTRVVFPASEREVTLRVSNTSGTPVLAQAWIDDGRQDELQVPFSVTPAVTRVEPNGGAVLRIAYLKPLPTDRESLFWLNILEVPP--------RFSFRSRFKLFFRPSQLKSVDSAAGKLQWKFL-EVVQVNNPTPYYVSFASVELIV-DGRVMSVGKGMVAPFSTKEFDWME--AASVRYEVINDYGGRNT-HDRALG
2	SPARKS	3q48a	0.190	0.844	5.398	threading_2	----------------------IAQGTRVVFPASEREVTLRVSNTSGTPVLAQAWIDDGRQDELQVPFSVTPAVTRVEPNGGAVLRIAYLKPLPTDRESLFWLNILEVPP--------RFSFRSRFKLFFRPSQLKSVDSAAGKLQWKF-LEVVQVNNPTPYYVSFASVELI-VDGRVMSVGKGMVAPFSTKEFDWME--AASVRYEVINDYGGRN-THDRALG
3	PROSPECT2	1p5uA	0.226	0.888	3.421	threading_3	----------------SKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENK----EPFVVTPPLFRLDAKQQNSLRIAQAGGFPRDKESLKWLCVKGIPPKDPDGVFVQFAINNCIKLLVRPNELKGTIQFAENLSWKVDGGKLIAENPSPFYMNIGELTF-----GGKSIPSHYIPPKSTWAFDLPKAGARNVSWRIINDQGGLDRLYSKNVT
4	PPA-I	3q48A	0.190	0.844	3.088	threading_4	----------------------IAQGTRVVFPASEREVTLRVSNTSGTPVLAQAWIDDGRQDELQVPFSVTPAVTRVEPNGGAVLRIAYLKPLPTDRESLFWLNILEVPP--------RFSFRSRFKLFFRPSQLKSVDSAAGKLQWKFLEV-VQVNNPTPYYVSFASVELIV-DGRVMSVGKGMVAPFSTKEFDWME--AASVRYEVINDYGGRN-THDRALG
5	HHPRED-l	2co7_B	0.169	0.871	5.603	threading_5	---------------ATKLFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAAD-KSSPAPFLVMPPLFRLEANQQSQLRIVRTGDMPTDRETLQWVCIKAVPPE---TLDLNLSINACDKLIFRPDAVKGTEDVAGNLRWVETGNKLKVENPTPFYMNLASVTV----GGKPITGLEYVPPFADKTLN-----HGDIEWRVITDFGGESHPFHYVL-
6	HHPRED-g	2co7_B	0.175	0.866	4.917	threading_6	---------------ATKLFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKS-SPAPFLVMPPLFRLEANQQSQLRIVRTGDMPTDRETLQWVCIKAVPPE----LDLNLSINACDKLIFRPDAVKGPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTV----GGKPITGLEYVPPFADKTLN-----HGDIEWRVITDFGGESHPFHYVL-
7	SP3	3q48a	0.190	0.844	5.237	threading_7	----------------------IAQGTRVVFPASEREVTLRVSNTSGTPVLAQAWIDDGRQDVLQVPFSVTPAVTRVEPNGGAVLRIAYLKALPTDRESLFWLNILEVPP--------RFSFRSRFKLFFRPSQLKSVDSAAGKLQWKF-LEVVQVNNPTPYYVSFASVELIV-DGRVMSVGKGMVAPFSTKEFDWME--AASVRYEVINDYGGRNT-HDRALG
8	SAM-T99	3dpaA	0.193	0.902	4.667	threading_8	--------------------AVSLDRTRAVFDGSEKSMTLDISNDNQLPYLAQAWIENENQEKITGPVIATPPVQRLDPGAKSMVRLSTTPDLPQDRESLFYFNLREIPPRSEKANVLQIALQTKIKLFYRPAAIKTPNEVWQQLILNKVSGGYRIENPTPYYVTVIGLGGSEKQAEEGEFETVMLSPRSEQTVKSAN--YNTPYLSYINDYGGRPVLSFICNG
9	MUSTER	2co6B	0.167	0.911	3.010	threading_9	------------LNSATKLFSVKLGATRVIYHAGTG-ATLSVSNPQNYPILVQSSVKAADKS-SPAPFLVMPPLFRLEANQQSQLRIVRTGGMPTDRETLQWVCIKAVPPENEATLDLNLSINACDKLIFRPDAVKGPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVG----GKPITGLEYVPPFADKTLNMPGS-HGDIEWRVITDFGGESHPFHYVL-
10	SPARKS	1p5ua	0.226	0.888	5.336	threading_10	----------------SKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENK----EPFVVTPPLFRLDAKQQNSLRIAQAGGFPRDKESLKWLCVKGIPPKDPDKVFVQFAINNCIKLLVRPNELKGTIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKS-----IPSHYIPPKSTWAFDLPKGLAGNVSWRIINDQGGLDRLYSKNVT

Predicted Tertiary Structure


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TM-score=0.847 to 2co6B SCOP code=b.1.11.1	TM-score=0.908 to 2co6B SCOP code=b.1.11.1	TM-score=0.838 to 2co6B SCOP code=b.1.11.1	TM-score=0.901 to 1p5uA SCOP code=b.1.11.1	TM-score=0.836 to 2co6B SCOP code=b.1.11.1