Template-based Modeling Results for YHBX_ECOLI

Submitted Primary Sequence

>Length 541
MTVFNKFARTFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDKQGNPTPEGQG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTVFNKFARTFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDKQGNPTPEGQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHCCEECCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCEEEEEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCHHHCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTVFNKFARTFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDKQGNPTPEGQG
4511220020010000000000000012000000010000000000000001100000001000000000000000000000110101001000100121213101300000000000000000000001111212111220000000000000000001101210211210011000010000010011110011022123012123213213222433222000000011021201202212321022021023201002100001121120010011132222232231231001002211120000002220331121120011322312213011210021012002322333200000001112111221132222232312110000000100010002002103433000000011023222233211121132123310200000001321242133212222101110010001002022332232123102223231100123120011220433113333233234245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTVFNKFARTFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDKQGNPTPEGQG
1	MUSTER	2w8dB	0.133	0.625	1.068	threading_1	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSSDVTEVENKANYDVPNNVYFGKAEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNKLDNETFYFDNFFHQTGQGAEFENSLYPLAQGSVFVNKNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEYKAFDSAYEENTKNYGKDKPFFKESPLL--ESLPQPFYTKFITLSNHFPFGDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDKSIIVYGDHYGISENHNKAAKVLEITDYDNAQLQRVPLFIHAA-----GVKGEKVHKYAGDVDVAPTILHLLGVDTKDYLSGSDILSKEHRE--VIPFRNGDFIKYTKISGKYYDTKTGKELDESEV
2	PROSPECT2	1w36B1	0.104	0.887	1.877	threading_2	MSIAALYLRLLELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRDPQQYRIFRRIW-----------HHQPETALLLIGD----PKQAIYAFRGADIFTYMKARSEVHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQ-----PAMKMWLMEGESCGVGDYQSTVCAAQIRDWLQAGQRGEALLMNGDDARPVRA----------------------SDISRSRQEAAQVRDALTLLEIPSVYLSNRDRLETNFRVQEQAFYHDRHSFEAVLDLCSLGVAPLVRRRGD-----KKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQT--------------GDNQPWQVNDV
3	PROSPECT2	1qsaa	0.102	0.904	1.815	threading_3	DSLRSRYAQIKQAWPYLEYRQITDDLMNQPAVTVTNFVRAPPARTLQSRFVNELARREDWRGLLAFCNYYYAKWACDKLFSVWRASGKQDPLAYLERIRGNTGLVTVLAGTIASAIISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDE----------WRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNL-------------------DNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHL-----EERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWN-------------PKVKSPVGASGLMQIMPGTAT-----HTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVSAGRIDAVAFSIPFSEYFMGDKPTLMSARRY
4	SAM-T99	2vqrA	0.140	0.516	1.817	threading_4	------------------------------------------------------------------------------------------------------REGVTFRNHVTPGPARASLLTGLYLMNHRAVQNTVPLDQRHLNLGKALRGVGYDPALIGYTTTVPDPRTTMEGYFGWVAQNGFDLPEHRPDIWLPEGEDAVAGATDRPSRIP-------------------------------------KEF-SDSTFFTE-------------RALTYLKGRDGKPFFLHL----------------------GYY----------------------------------RP-------------HPPFVA-SAPYHAMYRPEDQMRATYCGLITEVDDCLGRVFSYLDEDDTLIIFTSDHGEQL--GDHHLLGKIGYN--DPSFRIPLVIKDAGENARAG--AIESGFTESIDVMPTILDWLGGKIPHACDGLSLLPFLSEGRP---------------------------------
5	SPARKS	2w8da	0.126	0.628	2.646	threading_5	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSSDVTEVENYKANYDVPNNVYFGKAEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNKLANETFYFDNFFHQTGQGKSDAEFENSLYPLAQGSAQNTLQSVPAILKSKNYTSATFWNRNEYKGIDKFFDSAYYDNEENTKNYGKDKPFFKESPL--LESLPQPFYTKFITLSNHFPFGDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDKSIIVYGDHYGISENHNKAAKVLGKDEITDAQLQRVPLFIHAAGVKGEKV-----HKYAGDVDVAPTILHLLGVDTKDYLSGSDILSKEHREVIPFRNGDFISPKYTKISGKYYDTKTGKELDESEV
6	PROSPECT2	1qgra	0.097	0.974	1.795	threading_6	MELITFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWASQCVAGIACAEILIPQLVANVTNPNSTEHMKESTLEIDPEQLQDKSNEILTAIIQGMALLNSLEFTKANFDKESERHFIMQVVCEAVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDPFIKEHIKNCELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQVLQMESHIQSTVQHQDALQIFSGGVQEDALMAVSYMEAFKPFLGIGLKNYAEYQVNLGNENVHRSVKPQQASQAQVDKSDYDMVDYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTCTAFGKDVLKLVEARPMI--------------HELLTEGRRSKTNKNQA
7	PPA-I	2w8dB	0.142	0.627	1.458	threading_7	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSSDVTEVENYKANYDVPNNVYFGKAEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNKLAHDTFYFDNFFHQTGQGKSDAEFELAQGSVFVNKAQNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEYKAEGYDNEENTKNYGKDKPFFKESPLL--ESLPQPFYTKFITLSNHFPFGDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDKSIIVYGDHYGISENHNKAAKVLGKDEITDAQLQRVPLFIHAAGVKGE-----KVHKYAGDVDVAPTILHLLGVDTKDYLSGSDILSKEHREV--IPFRNGDFIKYTKISGKYYDTKTGKELDESEV
8	HHPRED-l	2vqr_A	0.135	0.575	4.314	threading_8	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKNVLLIVVDQWRADFVPHVLRDFLKTPNLDRLCREGVTFRNHVTTCVP-GPARASLLTGLYLMNHRAVQRHLNLGKALRGVGYDPALIGYTTTVPGFHPVGAFEPNQNGFIPKEFSDSTFFTERALTYLKGRDGKPFFLHLGYYRPHPPFVASAPY-HAMYAELRQMRATYCGLITEVDDCLGRVFSYLDEDDTLIIFTSDHGEQLGDHH--L--LGKIGYNDPSFRIPLVIKDAGENA--RAGAIESGFTESIDVMPTILDWLGGKIPHACDGLSLLPFLYDSLCVIQDERYKYVHFPLFFDLRHDPNEFTNLADDP-
9	HHPRED-g	3ed4_A	0.146	0.582	3.688	threading_9	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPN-LVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGLGRNELTIANLLKAQGYDTAMMGLNAGGDRTDQPQAQLRNGQPTPRADKMSGEYVSSEVVNWLDNKKSKPFFLYVAFTEVHSPLADMYSQYMSAYQKQHRGVGEYYANISYLDAQVGKVLDKIKAMNTIVIFTSDNGP--VTREADGLRGRKDNLWEGGIRVPAIIKYGKHLPQ---GMVSDTPVYGLDWMPTLAKMMNFKLPTDFDGESLVPVLEQKEKPLIFGIDDPTDEWAIRDGWKIDRKSDRYETLKK
10	SP3	2w8da	0.126	0.628	2.035	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSSDVTEVENYKANYDVPNNVYFGKAEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNKLANETFYFDNFFHQTGQGKSDAEFENSLYPLAQGKAQNTLQSVPAILKSKNYTSATFWNRNEYKAEDKFFDSAYYDNEENTKNYGKDKPFFKESPL--LESLPQPFYTKFITLSNHFPFGDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDKSIIVYGDHYGISENHNKAAKVLGKDEITDAQLQRVPLFIHAAGVKGEKV-----HKYAGDVDVAPTILHLLGVDTKDYLSGSDILSKEHREVIPFRNGDFISPKYTKISGKYYDTKTGKELDESEV

Predicted Tertiary Structure


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TM-score=0.537 to 1o98A SCOP code=c.105.1.1	TM-score=0.486 to 1w36E SCOP code=c.37.1.19	TM-score=0.544 to 1o98A SCOP code=c.105.1.1	TM-score=0.710 to 1slyA SCOP code=a.118.5.1	TM-score=0.509 to 1n2lA SCOP code=c.76.1.2