Template-based Modeling Results for YHBU_ECOLI

Submitted Primary Sequence

>Length 331
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTIGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTIGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ
CEEEECCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTIGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ
2101001221200100021000000001321010111122312231021001003423120000000001331122022002101401010000001000210032123020000020001123001001331301000002202131032005303010100000000000211000001112313222100110011113222322324222000122332332222211411100223321023222011003102200302010010222342120012003001200230333333223222003101200312212210234434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSSYLTGESPNTIGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ
1	SPARKS	3iwpa	0.137	0.686	1.085	threading_1	FLMEVCVDSVESAVNAERGGADRIELCSGLSEG-----GTTPSMGVLQVVKQSVQ---IPVFVMIDFLYSDREIEVMKADIRLAKLYGADGLVFGDKELCMSLMAICRPLPVTF-HRAMVHDPMAALETLLTLGFERVLTSALEGLPLIKRLIEQAKGRIVVMPGGGI----------------TDRN----------LQRILEGSGATEFHCSARSTRDSGMKF-RNSSVAMGASLSCSEYSLKV---TDVTKVRTLNAIAKNIL-----------------------------------------------------------------
2	PROSPECT2	1lt7a	0.067	0.770	1.212	threading_2	KGIVIGDGGFVFAREFLRAGSNVMQT--------------FTVNEAAADIARQVADEGDALVAGGSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYVWAVETLIASGKPVAATMAILHGVPPGEAAVRLVKAGASIIGVNCHFDTVKLMKEGLEAAQLKAHLMSQPLA---YHTPDANKQGFIDLPEFPFGLEP----------------------------------------------------RVATRWDIQKYAREAYNLGVRYIGGCCGFE-----PYHIRAIAEELAPERGFLPPRARARKEYWENLRIASGRPYNPS--MSKPD
3	HHPRED-l	3iwp_A	0.133	0.683	1.040	threading_3	FLMEVCVDSVESAVNAERGGADRIELCS-----GLSEGGTTPSMGVLQVVKQ---SVQIPVFVMIPRLYSDREIEVMKADIRLAKLYGADGLVFGALELCMSLMAICRPLPVTFHRAFDVHDPMALETL-LTLGFERVLTSALEGLPLIKRLIEQAKGRIVVMPGGGITD---RNLQ--RILEG-----SGAT----------EFHCSRSTRDS--------GMKFRNSSVAMGASLSC---------------------------SEYSL--KVTDVTKVRTLNAIAKNIL---------------------------------------
4	PROSPECT2	1xi3A	0.149	0.547	1.209	threading_4	LYVITDRRLVESVREALEGGATAIQMRIKNAPTREM-------YEIGKTLRQLTREYDALFFVDDR--------------VDVALAVDADGVQLPEDMPIEVAKEIAPNLIIGASV----YSLEEALEAEKK-GADYLGAARVIGLEGLRKIVESVKIPV--VAIGGI-----------------NKDN--------------------------------------------------------------------AREVLKTGVDGIAVISGAED---VRKATEELRKIVEEVL----------------------------------G
5	HHPRED-l	2bdq_A	0.139	0.544	1.039	threading_5	ILREFCAENLTDLTRLDKAIISRVELCD-----NLAVGGTTPSYGVIKEANQYLHEKGISVAV-IPRVYNDLELRI-EEDILRAVELESDALVLGITEAIEQLLPATQGLPLVFH-AFDVIDKKSIDQL-VALGFTRILLHGIENIKHIKALVEYANNRIEI-VGGGVTAE---N----------------------------------------------------------------------------------YQYICETGVKQAHGTRIT--------------------------------------------------------
6	PROSPECT2	1muma	0.122	0.692	1.156	threading_6	LHLQIVTINANHALLAQRAGYQAIYLSGGAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDVDRIRAAVDAKTDPDFVIMARTDALAVEGLDQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEF----------------GATPLFT-------------------------------------------------------------------TDELRSAHVAMALYPL-----SAFRAMNRAAEHVYNVLRQEGTQSINYYQYEEKLDNL--------------FA
7	PROSPECT2	1tv7A	0.081	0.779	1.153	threading_7	EQIKDKLGRARIAKVYAELGVKKIRITGGEP----------LMRRDLDVLIAKLNQIDEDIGLTTNGLL-------LKKHGQKLYDAGLRRINVSDDTLFQSINNRNIKAT----------TILEQIDYATSIGLNNVVIQKGINDDQIIPMLEDKHIEIRFIEFMDV--------------GNDNGWDFSKVVTKDEMHFEIDPVEPKYFGEVAKYYRHKDNGVVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVT-------------DEELKEQFKALWQ-------IRDDRYSDERTAQTVANR------------Q
8	PROSPECT2	1qtwa	0.123	0.764	1.147	threading_8	MKYIGAAGGLANAIRAAEIDATAFALFTKNQRQ---WRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINRDAFIDEMQRCEQLGLSLLNFHPG-----------------SHLMQISEEDCLARIAESIGVTAVIENLGFKFEHLAAIIDGVEDKSRVGVCI---------DTCHAFAAGYDLRT--------PAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG-----NIGHDAFRWIMQDDRFDGIPLI-LETINP---------DIWAEEIA-----------------WLKAQQT---------EKAVA
9	MUSTER	2zunB	0.122	0.867	0.624	threading_9	TPNHVVHGLEDMLLQIKSLGFNAIRL-TESVKPGTQPIGIDYSLQIMEKIIKKAGDLGIFVLLDYHRIWYTEDEEDFINTWIEVAKRKYWNVIGADLK--EPHSVTSPPAAYTDGTGATWGMGNPATDWNLAA------------ERIGKAILKVAP-HWLIFVEG---TQFTNPKTDSSYKWGYNAWWGGNLMA-------VKDYPVNLPKNKLVYS-------VYGPDVYNQPYF--GPAKGFPDNLPDIWYHHFGYVKLELGYSVV-IGGKYGHGG--DPRDVIWQNKLVDWMIENK----FCDFF--YWSWNPDSGDTGGILQDDWT
10	SPARKS	1vlia	0.131	0.879	0.889	threading_10	VFIIAEAGIFALIDAAAEAGADAVKFYQKDPDVSIFSLVQSEPAEWILPLLDYCREKQ----VIFLSTVCD------EGSADLLQSTSPSAFKIAHLPLLKYVARL--NRPIFSTAGAEISDVHEAWRTIRAEGNNQIAIPEYSNLSVIPLAAAFPEAVIGFSDHHPTEAPCLGAKLIEKHFT-IDKNLPGADHSFALNPDELKEVDGIRKTEAELKQGITKPVSEKLLGSSYKT-TTAIEGEIRNFAYRGIFTTAPIQKFSEDNIAVLRPGQKPQHPRFFELLTSG-VRAVRDIPADWDDILLKD-------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.741 to 1x7iB SCOP code=c.1.30.1	TM-score=0.596 to 1vkfB SCOP code=c.1.29.1	TM-score=0.712 to 1x7iB SCOP code=c.1.30.1	TM-score=0.691 to 1xi3A SCOP code=c.1.3.1	TM-score=0.607 to 1x7iB SCOP code=c.1.30.1