Template-based Modeling Results for YHBE_ECOLI

Submitted Primary Sequence

>Length 321
MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFLMASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWGVIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQLACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFLMASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWGVIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQLACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFLMASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWGVIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQLACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE
553220100000000000000010001000320210000000000000000000003332331321212200000000000000000000000200011001000100000000000001323031110000000000000000211121114222111000000000000000000021013311110000000000000000001002012011100000000000000000000200220311100000100000000000000101031012220100000000000000000100220020122011222234234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFLMASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWGVIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQLACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE
1	MUSTER	3zuxA	0.115	0.894	1.054	threading_1	IKISSFIGKTFSLWAALFAAAAFFA---TFKWAGP----YIPWLLGIIMFGMGLTL--KPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLAEIAVGVILVGCCP-TASNVMTYLARGNVALSVAVTSVSTLTSPLLT--PAIFLMLAGEMQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPQKALTIEVGSGLAAALAAAHFAAAPVVAV-----PGALFSVWHNISGSLLATYWAAKA-----------------
2	SPARKS	2x1gf	0.053	0.947	1.495	threading_2	GGPKIVLNRLCISLGAYIVHGEEVINTFQNQRSADVQLWIMLEVLTAIPE----EAQVIHTSVKRVVLRAEIAKRVQLVIHTVERYLKLQMN-RVWDAEAYSNMNRAVKCVGTWIKNI----GYTIEGCVTITAVLLEVVHKCYWPC------IHGCMTADENELAESCLKTMVNIIIQPDCHNYPKTAFVLIKMFLDSL--SEITKTEWKRENDNEDIIVHIYMLFVSSVESTLLLSGITSADPELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMLQDEVFKCWEYIKPLYAHLTRILVRKSEQPDEKSLAK
3	PROSPECT2	1jdha	0.065	1.000	1.686	threading_3	SKKEASRQMVSAIVRTMQNTNDVETARCTAGTLSGGIPALVKMSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLLLGTLVQLLGSDDINVVTCAAGILSNLGIEALVRTVLRAGDREDITEPAICALRHLWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILAAGVLCELAQDKEAAEAIEAEGHSRN
4	PPA-I	3zuxA	0.061	0.922	1.409	threading_4	----NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLAEIAVGVILVGCCPGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIM--ESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAA--APVVAVPGALFSVWHNISGSLLATYWAAKA-----------------
5	HHPRED-l	3b5d_A	0.172	0.308	2.968	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------YLGGAILAEVIGTTLMKFSEG---------------------------FTR-----LWPSVGTIICYCASFWLLAQTLAYIPTGIAYAISGVGIVLISLLSWG--------FFGQRLDLPAIIGMMLICAGVLIINLLS--------------------
6	HHPRED-g	3b5d_A	0.173	0.305	2.986	threading_6	------------------------------------------------------------------------------------------------------------------------------------------------------------------YLGGAILAEVIGTTLMKFS-EG-----------------------------FT--RLWPS-VGTICYCASFWLLAQTLAYIPTGIAYAISGVGIVLISLLSWG--------FFGQRLDLPAIIGMMLICAGVLIINLLS--------------------
7	SP3	3zuxa	0.133	0.913	0.528	threading_7	----NILSKISSFIGKTFS--LWAALFAAAAFFAPDTFKWGPYIPWLLGIIMFGMGLTKPSDFDILFKH--PKVVIIGVIAQFAIMPATAWCLSKLAEIAVGVILVGCPTASNVMTYL-ARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMLLPIVLGLIVHKVLGSKTLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGDAQKALTIEVG-MQNSGLAAALAAAH---FAAAPVVA--VPGALFSVWHNISGSLLATYWAAKA-------------
8	SAM-T99	3b61A	0.159	0.333	1.131	threading_8	--------YIYLGGAILAEVIGTTLMKFS--------------------------------EGFTR----LWPSVGTIIC-YCASFWLLAQTLAYIPTGIAYAI-----------------------------------------------------WSGVGIVLISLLSWG-----------------------------------------------------------------------------------------------------FFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH---------------
9	MUSTER	3g61A1	0.091	0.988	0.904	threading_9	AGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDM-TDSFASVGNVSKNSTNMSEADKRAMFAKLEE-EMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWF-DVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAY-TQQL
10	SPARKS	2xwub	0.093	1.000	1.308	threading_10	ISQPDAQVNTLLKLIPLVLGLQEQLRQAVQNGDMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKGFWSKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSYSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPSVSSVSTLKKICRECKYDLAANIVQDVLMKQIHKCMWLMQALGFLLVEEILKNLHSLISPIQQLEKLAEEIPNPS

Predicted Tertiary Structure


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TM-score=0.417 to 1pw4A SCOP code=f.38.1.1	TM-score=0.428 to 2r2vA SCOP code=h.1.3.1	TM-score=0.640 to 3ea5B SCOP code=a.118.1.1	TM-score=0.607 to 1wa5B SCOP code=a.118.1.1	TM-score=0.421 to 1pw4A SCOP code=f.38.1.1