Template-based Modeling Results for YHAV_ECOLI

Submitted Primary Sequence

>Length 154
MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH
CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH
5521010111000002001300220022022133312331332110100000020013201212202102213221204133001021122100000101444100000001133212323432101100110053110112032003203435
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH
1	HHPRED-l	3kha_A	0.207	0.597	1.124	threading_1	-----A---YFLDFDERALKEWRKLGSTV---------------REQLKKKLVEVL-----ESPRIEA----NKLR-G-MPDCYKIKLRSSGYRLVYQVIDEKVVVFVISV---------GKAERVYSEAVKRIL-------------------
2	HHPRED-g	3kha_A	0.207	0.597	1.111	threading_2	-----A---YFLDFDERALKEWRKLGSTV---------------REQLKKKLVEV-----LESPRIEA----NKLR-G-MPDCYKIKLRSSGYRLVYQVIDEKVVVFVISV---------GKAERVYSEAVKRIL-------------------
3	HHPRED-l	3g5o_B	0.123	0.526	1.055	threading_3	-------VPYTVRFTTTARRDLHKLPPRIL---------------AAVVEFA----FGDLSREPLRV----GKPLR-RELAGTFSARR--GTYRLLYRIDDEHTTVVILRVD---------HR-------------------------------
4	HHPRED-g	3g5o_B	0.123	0.526	1.110	threading_4	-------VPYTVRFTTTARRDLHKLPPRIL---------------AAVVEFA----FGDLSREPLRV----GKPLR-RELAGTFSARR--GTYRLLYRIDDEHTTVVILRVD---------HR-------------------------------
5	HHPRED-g	2khe_A	0.202	0.578	1.109	threading_5	-------MGYRIEFDPRAEKELEKLDRE---------------VARRILRFLRERV-A-TLEDPRSL----GEPLRGPELGRFWKYRVG--DYRLICHIQDREATVLVLRV---------GHARDVYR--------------------------
6	HHPRED-g	1wmi_A	0.184	0.565	1.040	threading_6	-------MTYRVKIHKQVVKALQSLPKAHYR-------------------RFLEFR-DILEYEPVPREFDVIKLEGT-GDLDLYRARL--GDYRVIYSVNWKDKVIKILKLK---------PRGRA----------------------------
7	MUSTER	2h7fX2	0.118	0.825	0.672	threading_7	---------KRDRIFVRVYNVMKRINSFINKNIKKSS-----TDSNYQLAVFMLMETMFFIRFGKMKYLKENETVGLLTLKN-KHIEISPD--KIVIKFVGKDKVSHEFVVHKSNR---------LYKPLLKLTDDSSPEEF-ERKVYESIKQF
8	SPARKS	2khea	0.202	0.578	0.696	threading_8	-------MGYRIEFDPRAEKELEKL-----------D----REVARRILRFLRERVAT--LEDPRS----LGEPLRGPELGRFWKYRV--GDYRLICHIQDREATVLVLRV---------GHARDVYR--------------------------
9	PROSPECT2	2fhxA	0.065	1.000	0.780	threading_9	LPYNLTATPFENLGTQTLMDWVAKTMKPNEIYKKMGAEDLTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADDLKQGKVFSFSNELVEVSFPGPAHSPDNVVVYFPKKKGYLGDANVKAWPDSARRLKKFDAGPEMVNKTIKVAEKAV
10	PPA-I	2h7fX2	0.094	0.831	0.962	threading_10	---------KRDRIFVRVYNVMKRINSFINKNIKKSS-----TDSNYQLAVFMLMETMFFIRFGKMKYLKENETVGLLTLKN-KHIEISPDKIVIKFV-GKDKVSHEFVVHKSNR----------LYKPLLKLTDDSSPEEFLERKVYESIKQF

Predicted Tertiary Structure


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TM-score=0.539 to 1wmiA SCOP code=d.298.1.2	TM-score=0.550 to 1wmiA SCOP code=d.298.1.2	TM-score=0.595 to 1wmiA SCOP code=d.298.1.2	TM-score=0.595 to 1wmiA SCOP code=d.298.1.2	TM-score=0.595 to 1wmiA SCOP code=d.298.1.2