Template-based Modeling Results for YHAO_ECOLI

Submitted Primary Sequence

>Length 443
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS
CCCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS
55423332222322221231212322134213232210000000000001110000101012201110000001011001000200010014133143112000110133101000000001102201000100011012001201113121120000000000000001231120101001011001000000001110020212002202201100110000000000001002000100111223332231032102200100000000000000000101111320130242202000000320213011003000000000000000000000012101100120033323234133310210000000000000101111001001010100000000000000120210241311010000000000000101214
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS
1	MUSTER	3gi9C	0.168	0.874	1.273	threading_1	ME-------LKNKK----------------LSL----WEAVSMAVGVMIGASIFSIFVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDN------IITGALSILLWMSYVISIALFAKGFAGYFLPLPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIP-DLAPSAVSGMIFASAIFFLSYMGFGVITNAS-------EHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPF---LGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDFFERKVWFKSFNMEGVASITSAVFMVIYLFVIL---SHYIL-EVGGVIFSFIVVLGVFLLLLYYQWITN----RFVFYGIIATFIGVLIFEIIY
2	SPARKS	3ob6a	0.125	0.869	1.899	threading_2	---------------------------ADAHKVGL--IPVTLMVSGNIMGSGVFLLPANASTGG--IAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFFPILK----DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIM-------GMIPNAALRVSA----SPFGDAARMALGDT---AGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADPIFARVNKAGTP----VAGLIIVGILMTIFQLSSISPGVSSVSVIFTPYLYTCAALLLLG--HGHFGKARP---AYLAVTTIAFLYCIWAVVGSG
3	PROSPECT2	1jdha	0.089	0.986	2.053	threading_3	AVVNLIRKLLNDEDQVVVNKSKKEASRHAIMRSTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPSVLFYAITTLHNLLLHQEGAAGGLQKMVALLNKTLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLNKPAIVEAGQALGLHLTDPSQRLVQNCLWTLRNLSDAATK------QEGMEGLLGTLVINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLRGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILRIVIRGLNPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEGATAPLTELLHATYAAAVLFRMS
4	PPA-I	3gi9C	0.148	0.885	2.187	threading_4	------------------------------MELKNKKWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDN------IITGALSILLWMSYVISIALFAKGFAGYFLPLIAPINNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDLA-PSAVSGMIFASAIFFLSYMGFGVITNAS-------EHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPF---LGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFER-KVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITN
5	HHPRED-l	3gia_A	0.182	0.858	4.234	threading_5	---------------------------LKNKKLSLWEA--VSMAVGVMIGASIFSIFGIAGRNLPETFILSGIYALLV----AYSYTKLGAKIVSNAGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLINA-PI---NTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDLA-PSAVSGMIFASAIFFLSYMGFGVITNAS----EHIE---NPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKAS---ENALAVAAKPFLGN---LGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGE---LPEERKVWFKSTEGLYITSALGVLFALLFNMEGVSITSAVF----MVIYLFVILSHYILID-EVGGRKEIV---IFSFIVVLGVFLLL-
6	HHPRED-g	3gia_A	0.184	0.869	4.846	threading_6	-------------------------------LKNKKLSLWVSMAVGVMIGASIFSIFGIAGRNLPETFILSGIYALLVAY----SYTKLGAKIVSNAGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLIN---API-NTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDL-APSAVSGMIFASAIFFLSYMGFGVITNAS-----E--HIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASE---NALAVAAKPFLGN---LGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGEL-PEFFERKVWFKSTEGLYITSALGVLFALLFNMEGV--ASITS-AVFMVIYLFVILSHYILID-EVGGREIVIFSFIVVLGVFLLLLYYQW
7	SP3	3ob6a	0.137	0.858	1.775	threading_7	---------------------------ADAHKVGL--IPVTLMVSGNIMGSGVFLLPANASTGGI--AIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFFPILK----DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKR----------NVPIATIGGVLIAAVCYVLSTTAMIPNAALRVSA----SPFGDAARMALGD---TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADPIFAR------VNKAGVAGLIIVGILMTIFQLSSISPGVSSVSVIFTPYLYTCAALLLLG--HGHFGKARP---AYLAVTTIAFLYCIWAVVGSG
8	SAM-T99	3cwbD	0.149	0.530	0.584	threading_8	-----------------------------------GELELHPPAFPWSHGGPLSALDHSSVRRGFQVYKQVCSACHSMDYVAFRNLIGVTHTEAEAKALAEEVE----VQDGPDENGELFMRPGKISDYFPKPYPNPEAARAANNGALPPD-----------LSYIVNARHGGEDYVFSLLTGYCDPPAGVVVREGLHYNPYFPGQAIGMAPPIYNEILEYDDGTPATMSQIA--------VCTFLRWAAEPEHDQRK-----RMGLKMLLISAL----------------------LTSLLYYMKRHKWS-----------------------------------VLKSRKMAY----------------------------------------------------------------------------------------
9	MUSTER	3l1lA	0.145	0.840	1.192	threading_9	-----------------------------AHKVG---IPVTLMVSGAIMGSGVFLLP--ASTGG--IAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLAC---W-IGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGW-FW--------FRGETYMAAIQSTLNVTLWSFIGVESASVAA----------GVVKNPKRNVPIATIGGVLIAAVCYVLSTTAMIPNAALRV---SA-SPFGDAARMALGD---TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDLFPPIF--ARVNKAGTPVAGLIIVGILMTIFQLSS-ISPNATKEFGSSVSVIFTLVPYLYTC--AALLLLGGKARPAYLAVTTIAFLYCIWAVV
10	SPARKS	3l1la	0.131	0.847	1.728	threading_10	-----------------------------AHKVGL--IPVTLMVSGAIMGSGVFLLPANASTGG--IAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIG----NIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGW---------FWFRGETYMAAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGM-------IPNAALR---VSASPFGDAARMALGDTAGAIVSF----CAAAGCLGSLGGWTLLAGQTAKAAAD---DGLFPPARVNKAGVAGLIIVGILMTIFQLSSISPNVSSVSVIFTPYLYTCAALLLLG--HGHFGKAR---PAYLAVTTIAFLYCIWAVVGSG

Predicted Tertiary Structure


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TM-score=0.677 to 2q6hA SCOP code=f.54.1.1	TM-score=0.676 to 2q6hA SCOP code=f.54.1.1	TM-score=0.681 to 2q6hA SCOP code=f.54.1.1	TM-score=0.688 to 1wa5B SCOP code=a.118.1.1	TM-score=0.672 to 2q6hA SCOP code=f.54.1.1