Template-based Modeling Results for YHAC_ECOLI

Submitted Primary Sequence

>Length 395
MFPVSSIGNDISSDLVRRKMNDLPESPTGNNLEALAPGIEKLKQTSIEMVTLLNTLQPGGKCIITGDFQKELAYLQNVILYNVSSLRLDFLGYNAQIIQRSDNTCELTINEPLKNQEISTGNININCPLKDIYNEIRRLNVIFSCGTGDIVDLSSLDLRNVDLDYYDFTDKHMANTILNPFKLNSTNFTNANMFQVNFVSSTQNATISWDYLLKITPVLISISDMYSEEKIKFVESCLNEPGDITEEQLKIMRFAIIKSIPRATLTDKLENELTKEIYKSSSKIINCLNRIKLTEMKEFSSEKIYDYIDIIIEDYENTKENAYLVVPQINYTMDLNIEDSSSEELLSDNTLEKDENSPDNGFEVGEYNTYEAYNSEKQYFTREDYTYDYDLLNAI
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFPVSSIGNDISSDLVRRKMNDLPESPTGNNLEALAPGIEKLKQTSIEMVTLLNTLQPGGKCIITGDFQKELAYLQNVILYNVSSLRLDFLGYNAQIIQRSDNTCELTINEPLKNQEISTGNININCPLKDIYNEIRRLNVIFSCGTGDIVDLSSLDLRNVDLDYYDFTDKHMANTILNPFKLNSTNFTNANMFQVNFVSSTQNATISWDYLLKITPVLISISDMYSEEKIKFVESCLNEPGDITEEQLKIMRFAIIKSIPRATLTDKLENELTKEIYKSSSKIINCLNRIKLTEMKEFSSEKIYDYIDIIIEDYENTKENAYLVVPQINYTMDLNIEDSSSEELLSDNTLEKDENSPDNGFEVGEYNTYEAYNSEKQYFTREDYTYDYDLLNAI
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHEEEECCCCEEEECCCCCHHHEECCCCCEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECHHHCCCCCCEEECCCCCCCHHHHHCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFPVSSIGNDISSDLVRRKMNDLPESPTGNNLEALAPGIEKLKQTSIEMVTLLNTLQPGGKCIITGDFQKELAYLQNVILYNVSSLRLDFLGYNAQIIQRSDNTCELTINEPLKNQEISTGNININCPLKDIYNEIRRLNVIFSCGTGDIVDLSSLDLRNVDLDYYDFTDKHMANTILNPFKLNSTNFTNANMFQVNFVSSTQNATISWDYLLKITPVLISISDMYSEEKIKFVESCLNEPGDITEEQLKIMRFAIIKSIPRATLTDKLENELTKEIYKSSSKIINCLNRIKLTEMKEFSSEKIYDYIDIIIEDYENTKENAYLVVPQINYTMDLNIEDSSSEELLSDNTLEKDENSPDNGFEVGEYNTYEAYNSEKQYFTREDYTYDYDLLNAI
54322222330121002221330231211211310021123022110200100220221020001020221010021000111220100010111300122322010112121423312202010202022002103401000001212000012120220203113021200021001102032231220200100001123202010100040010000022112221030022012322302331020010100320231201320133113201310220120023030230230123101200100020033133200000130112121313322133012332234333133100100100112112233110122222112201323
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFPVSSIGNDISSDLVRRKMNDLPESPTGNNLEALAPGIEKLKQTSIEMVTLLNTLQPGGKCIITGDFQKELAYLQNVILYNVSSLRLDFLGYNAQIIQRSDNTCELTINEPLKNQEISTGNININCPLKDIYNEIRRLNVIFSCGTGDIVDLSSLDLRNVDLDYYDFTDKHMANTILNPFKLNSTNFTNANMFQVNFVSSTQNATISWDYLLKITPVLISISDMYSEEKIKFVESCLNEPGDITEEQLKIMRFAIIKSIPRATLTDKLENELTKEIYKSSSKIINCLNRIKLTEMKEFSSEKIYDYIDIIIEDYENTKENAYLVVPQINYTMDLNIEDSSSEELLSDNTLEKDENSPDNGFEVGEYNTYEAYNSEKQYFTREDYTYDYDLLNAI
1	PROSPECT2	2bw3A	0.090	0.932	1.405	threading_1	SHQSRELKTVSADCKKEFFIKVKAEYGEHVNVEELLPSPITLSRKVTSDAEIKSAVEKDGASAT-------------IDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFER---------STAENIYKKLKAIFSQFNVEDLSFVTDRGANVVKSLANNIELNPILACKNIVKYFKKANLQHRLRSSLKSECPTRWNSTYTLRSILDNWESVIQILSEAGETQRFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIWHYTAFFFYPPALHQQEKVAQIKEFCLSKEDLELINRS-----SFNELSATQLNQDISTTSFFFKEIVILSEDFKVESIPASSAASERTFSLAGNIITEKRNRIGQQTVDSL
2	HHPRED-l	2qyu_A	0.201	0.808	1.255	threading_2	-------------------ATSSPSSPA--------DWAKKLTDAVLR-QKAGETLTAADR-----DFSN--ADFRNITFSKIL--PPSFMERDGDIIKGFN----------FSNSKFTYSD-------------I--SHLHFDECRFTYSKFSNSDMNEVFLQYSITTQPSFIDTTLKNTLIHKANLSGVILNEPDNVSG-GGNFIRLGFLNHEHSTIDSLPDKYSQEKVQAMEDLVKS--------LRGGRLT-EACIRP--VESSLVSVLAHPPYTQSALISEWLGPVPLP-APTYYQQRIGLFNQVILHDTDGTRQKAYLAHPAVSPHIHNGLQDSDTAMMLSTDTLLTTPDTAWDNFRAGENVSTAQISPVELFRHDFLAAFNQQAIDI-
3	PROSPECT2	2fnaA	0.099	0.767	1.377	threading_3	GLFDTSPKDNRKDEKEIEKLKGLRAPLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNY-----ISYKDFLLELQKEI--------NKLVKRLPSLLKALKNIQGIVIGNEIKFN---------RLSFANLLESFEQASELVKLRGVNLLPALAYAYDNLKRIKFISGSEGLLYDYLRV-EDPESPLFGRAFSTVEL------------------------KPFSREEAIEFLRRGFQEADIDFKDYEVVYEGWLTYFGFIYLDNKNLDFAINQTLEYAKKLILKEFENFGREIARKRYLNKWSDVKRALELEE------------------GIEISDSEIYNYLTHSWIIKEGEK---------------------------YCPSEPLISLA
4	PROSPECT2	3avrA	0.079	0.990	1.251	threading_4	SVSIYPSSAEVLKACRNNSSILLDKCPPPRPPSSPYPPLPKNKRDAFFPPLHQFCTNPNNPVTVIRGLAGALKLDLG--LFSTKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWHCESNRSHTTIAKYAQYQASSGTNIDLSDDKKWKLQLHELTKLPAFVRVVSAGNLLSHVGHTILMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFV--VPEGYWGVLNDFCEKNNLNFLMGSWWPNLEDLYEAGPLTACQYKLAVERYEWNKLQVHLSWNMARNIKVPKLFEMIKYCLLRTLKQCQTLREALIAAGKEIIWHGRTKEEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARKTSGNENFVVLEQYKMEMQVYDQF
5	PROSPECT2	1nt4A	0.098	0.878	1.249	threading_5	QTVPEGYAPLANNGSVLEQSTPNKWPEWDVPGGQLTTGGVLEVYMGHYMREWLAEQPPYTVYAYANSLQRTVATAQFFI---------------TGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAME----------------KELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQW-KVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKADSNIASLLTALDFKPYQLDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVY--------QSAEQL-----RNADALTLQAPAQRVTLELSGCPIDADGFCPMDKF---DSVLNEA
6	PROSPECT2	1f0ka	0.088	0.775	1.245	threading_6	KVRWLGTADRMEADLVPKHGIEIISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPD-VVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFP----GAFPNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEAAAYAWADVVVCRSGALTVSEIAAAGLPVPFQHKDRQQYWNALPLEKAGAIEQPQLSDAVANTLAGWSRETLLTMAERARAASIPD----ATERVANEVS--------------------------------------------------------------------------------RVARAL
7	MUSTER	3dwbA	0.170	0.939	0.618	threading_7	PVPHSRWGTSNLWEHNQAIIKHLLENSTASVSEAERTRIEELAKPLMELIERLGGWNITGP-WAKDNFQDTLQVVTA--HYRTSPFSADSKNSNSNVIQVDQSGLGLPSRDYYLNKT-ENEKV-----LTGYLNYMVQLGKLL--GGGDEEAIRP-QMQQI----LDF-ETALANITIPQEKRRDEE-LIYHKVTAAELQTLAPA-INWLPFLNFYPVEINESEVYDKEYLEQISTLINTTD--RCLLNNYMIWNLVRKTSSFQRFQDADEKFMEVMKFCVSDTENNLGFAPMEDSKSIATEIILEIKKAFEESLSTLRKSAKEIYNMIGYPNFIM-DPKELDKVFND--YTAVPDLYENAMRFFNFSWRVTADQLRKAPNRDQWSMTPPMVNAY
8	SPARKS	3bz5a	0.166	0.944	0.549	threading_8	WFPDDAFEMQATDTISEEQLATLTSDCHNSSITDM-TGIEKLTGTTLDLSQNLTYLACDSNKLTNLDVTTKLTYLTNKLVSQNPLLTYLNCARN-TLVSHNTQLTELDCH---LNKKITKLDVT-PQTLTTLDNKITELDV------SQNKLLNRLNCDTNNITKLDLNQIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCILLEIDLTHNTQLIYFQAEGCRKIKETQLYLLDCQAITELDLSQNP-KLV-----YLYLNNTELTE-LDVSHNTKLKSCVNAHIQ---DFSVGKIPALNEGQTITMPKETLTNNSLTIAVSPDLLQFGNPMPGDGGVYDQATNTITWENLSTDNPATYTFTSENGAIVGTVTTPF
9	PROSPECT2	2bw3A2	0.100	0.813	1.224	threading_9	SHQSRELKTVSADCKKEAIRDCRPEYGEHVNVEELLPSPITLSRKVTSDAEIKSAVEKDGASAT-------------IDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERST---------AENIYKKLKAI-------------FSQFNVEDLSSIKFVTDRGANVVKSLANN------------------------------------IRINCSSHLLSNVLENSFEETPELNCSSPSLCFVVPSKVKEICSPDVGDVADIAKLKVNIIKNVRIIIWHYTAFFFYPPALHQQEKVAQIKEFCLSKEDLELINRS---SFNELSATQLNQDISTTSFFFKEIVILSEDFKVESIPASSAASERTFSLAGNIITEKRNRIGQQTVDSL
10	PPA-I	3sqnA	0.135	0.939	0.619	threading_10	----YSLKRVITEKDLLRQIRLLVPQLTAKRL-AAQIQTT--ERTVFSDLQYIRSQLPADWSIETDSNQQTNELWSLFLPQSISIQLLKELLFTLSTSGVSYETLHIKKNQALRDFHLTTTTIQLIGAESNIRIFYHRL-------------LVPFTHNNYFFDDYSIHEEHYFQFLKQVYSSELTVETEEIFGACWFFINT----IRNKANCRVSQFSFDSKDVLFQLYQPSLAKLYASEGYLQGEESFFAFFCFLESWNDNVYGETLASALHTHYSQLRKSLQQFVTNLQTNLLDNLLLLFIKYTEPTLSEQFQLEYQELLALSKSNRYTTIEEPTYFLSLASLLEKQAIYSIQAQTTAYFLFQGEPAAYLGTRVKLQAIEYVELSQLTLNEA

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.596 to 2bw3A SCOP code=a.270.1.1	TM-score=0.457 to 2j8kA SCOP code=b.80.8.1	TM-score=0.615 to 2fnaA SCOP code=a.4.5.11	TM-score=0.446 to 1vrbD SCOP code=b.82.2.11	TM-score=0.784 to 1nt4A SCOP code=c.60.1.2