Template-based Modeling Results for YGJR_ECOLI


  Submitted Primary Sequence

>Length 328
MIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKINVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAQGVVVMDYGDFSVTLQHSKVSDSVLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKINVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAQGVVVMDYGDFSVTLQHSKVSDSVLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
CEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCEEECCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEHHCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEECCCCCCEEEEEECCEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKINVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAQGVVVMDYGDFSVTLQHSKVSDSVLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
2010000001200220030034024010000001223102200430302200100210051320100000001100000011012351100022011121210210020034341000100101001002101200351141220100000111323322313211111221120000000000000001011212101000111332121200000112312000000211322210101022000102311212200002333211202224322201100210010024322333212102100200120042020202223244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKINVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAQGVVVMDYGDFSVTLQHSKVSDSVLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
1MUSTER2poqX0.2490.9662.912threading_1ALRWGIVSVGLISSDFTAVLQTLPEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQ-GTLGDLRVARAEFGKNL-----THVPRAVDWAQAGGALLDLGIYCVQFISMVFGKPEKISVMGRRHETGVDDTVTVLLQYPGVHGSFTCSITAQLSNTASVSGTKGMAQLLNPCWCP-TELVVKGEHKEFLLPPVNGAGMSYEAKHVRECLRKGLKESPPLVESELLADILEEVRRAIGVTFPQD----
2SPARKS3ohsx0.2420.9704.155threading_2ALRWGIVSVGLISSDFTAVLQTLPEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQ-GTLGDLRVARAEFGKNLTH-----VPRAVDWAQAGGALLDLGIYCVQFISMVFGKPEKISVMGRRHETGVDDTVTVLLQYPGEHGSFTCSITAQLSNTASVSGTKGMAQLLNPCWCPTELVVKGEHKEFLLPPVDNGAGMSYEAKHVRECLRKGLKESPPLVESELLADILEEVRRAIGVTFPQD----
3PROSPECT23evnA0.1900.9454.592threading_3KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQA---KYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASIGEVISISSTTAYPNID-------HVTWFRELELGGGTVHFMAPYALSYLQYLFDATTHASGTATFPKGQSDSQSKLLLQLSNGLVDIFLTTRLNLPHEMIIYGTEGRLIIPHFWKTTHAKLVRNDTSARTIQVD-MVSDFEKEAYHVSQMILEGQRVSHIPQLTLSGVKIIEDLYRSWGK-------EG
4PPA-I3evnA0.1920.9513.618threading_4KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQA---KYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLAS-GEIGEVISISSTTAYPNI----DHVTWFRELELGGGTVHFMAPYALSYLQYLFDTITHASGTATFPKGQSDSQSKLLLQLSNGLVDIFLTTRLNLPHEMIIYGTEGRLIIPHFWKTTHAKLVRNDTSARTIQVDM-VSDFEKEAYHVSQMILEGQRVSHTPQLTLSGVKIIEDLYRSWGKEG-------
5HHPRED-l2ho3_A0.3430.9152.625threading_5MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVF-FKSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLAD--QVLGADFNYAKYSSK------------------GGALMDLGIYPLYAAVRLFGKANDATYHAQQLDNSIDLNGDGILFYPDYQVHIKAGKNITSNLPCEIYTTDGTLTLNTIEHIRSAIFTDHQGNQVQLPIQQAPHTMTEEVAAFAHMIQQPDLNQTWLYDAGSVHELLYTMRQTAGIRF-------
6HHPRED-g2ho3_A0.3340.9122.585threading_6MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFF-KSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLADVLGADFNYAKYS---SK------------------GGALMDLGIYPLYAAVRLFGKANDATYHAQQLDNSIDLNGDGILFYPDYQVHIKAGKNITSNLPCEIYTTDGTLTLNTIEHIRSAIFTDHQGNQVQLPIQQAPHTMTEEVAAFAHMIQQPDLNLYWLYDAGSVHELLYTMRQTAGIRF-------
7SP33ohsx0.2390.9704.343threading_7ALRWGIVSVGLISSDFTAVLQTLPRHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQ-GTLGDLRVARAEFGKNLTHV-----PRAVDWAQAGGALLDLGIYCVQFISMVFGKPEKISVMGRRHETGVDDTVTVLLQYPGEHGSFTCSITAQLSNTASVSGTKGMAQLLNPCCPTELVVKGEHKEFLLPPVPKNCNGMSYEAKHVRECLRKGLKESPPLVESELLADILEEVRRAIGVTFPQD----
8SAM-T992poqX0.2440.9634.072threading_8ALRWGIVSVGLISSDFTAVLQTLPRHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLGTLGDLRVARAEFGKN--------LTHVPRAVDWAQAGGALLDLGIYCVQFISMVFGKPEKISVMGRRHETGVDDTVTVLLQYPGEVHSFTCSITAQLSNTASVSGTKGMAQLLPCWCPTELVVKGEHKEFLLPPVPKNCNGMSYEAKHVRECLRKGLKESPPLVESELLADILEEVRRAIGVTFPQD----
9MUSTER3evnA0.1920.9512.909threading_9KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQA---KYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLAS-GEIGEVISISSTTAYP----NIDHVTWFRELELGGGTVHFMAPYALSYLQYLFDTITHASGTATFPKGQSDSQSKLLLQLSNGLVDIFLTTRLNLPHEMIIYGTEGRLIIPHFWKTTHAKLVRNDTSARTIQVDMV-SDFEKEAYHVSQMILEGQRVSHTPQLTLSGVKIIEDLYRSWGK----EG---
10SPARKS3rbva0.2280.9243.673threading_10PIRVGVIGCADIAWRALPALEAEPLTEVTAIASRRWDRAKRFTERFGG-EPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDE-GVIGEIRSFAASFTIP----------------PKGGALLDIGVYPIRAAGLFLGDLEFVGAVLRHEDRDVVVGGNALLTTRQGTAQLTFGMEHAYTNNYEFRGSTGRLWMNRVFTPPAVVHIERQDHAEQFVLPA-HDQFAKSIRAFAQAVLSGEHPREWSEDSLRQASLVDAVRTGARDIFP------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.851 to 1ydwB
SCOP code=c.2.1.3
TM-score=0.844 to 1ydwB
SCOP code=c.2.1.3
TM-score=0.840 to 1ydwB
SCOP code=c.2.1.3
TM-score=0.836 to 1tltB
SCOP code=c.2.1.3
TM-score=0.839 to 1ydwB
SCOP code=c.2.1.3