Template-based Modeling Results for YGJQ_ECOLI

Submitted Primary Sequence

>Length 230
MLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
22310121121001011001000000000000000002000101332222213202221000000022114101300110010032131200000022154323101001100132201230000122122111000202311222200000221101100100331202000010221213200111011000100000101002320321133120022233203248
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK
1	MUSTER	3ca8A	0.116	0.865	1.125	threading_1	-----------------------PFPTLSPATIDAINVIGQWLAQDDFSGE--VPYQADCVILAGNA-----VMPTIDAACKIARDQQIP-LLISGGIGHTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNVHTAIVVQDPTMQRRTMATFRRMTPRWLSYPGFVPQFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRVDFPAEVIHAWQTKH
2	SPARKS	3ca8a	0.127	0.857	1.617	threading_2	-----------------------PFPTLSPATIDAINVIGQWLAQDDFSGEV--PYQADCVILAGNAV-----MPTIDAACKIARDQQI-PLLISGGIGHTGRAEATILADIAHQWHIPHEKIWIEDQSTNCGENARFSIALLRVHTAIVVQDPTMQRRTMATFRRMTPRWLSYPGFVPQLGNNADSVVERYLSLLTGELPRL--RDDSDGYGPRVDFPAEVIHAWQTLK
3	PROSPECT2	3ca8A	0.096	0.857	2.044	threading_3	PFPTLS---------PATIDAINVIGQWLA----------------QDDFSGEVPYQADCVILAGNA-----VMPTIDAACKIARDQQIPLLISGGIGRTTGRAEATILADIAHQWHIPHEKIWIEDQSTNCGENARFSIALLRVHTAIVVQDPTMQRRTMATFRRMTGDNPDAPRWLSYPGFVPQLGVERYLSLL--TGELPRLRDDSDGYGPRGR-DFIVHVDFPRSL
4	PPA-I	3ca8A	0.114	0.839	1.045	threading_4	-----------------------PFPTLSPATIDAINVIGQWLAQDDFSGE--VPYQADCVILAGNAV-----MPTIDAACKIARDQQIPLLISGGTIRTTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNVHTAIVVQDPTMQRRTMATFRRMTGDQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPR-------GRDFIVHV
5	HHPRED-l	3ca8_A	0.129	0.843	5.135	threading_5	------------PFPT-----------LSPATIDAINVIGQWLAQDDFSGE--VPYQADCVILAGNAVM-----PTIDAACKIARDQQIP-LLISGGIGHTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNQHTAIVVQDPTMQRRTMATFRRMTGPWLSYPGFVPQLQGLWPV-ER-YLSL--LTGELPRLRDDSDGYGPRGDFPAEVIHAWQTL-
6	HHPRED-g	3ca8_A	0.130	0.804	3.545	threading_6	---PFPT----LS--PA-----------TIDAINVIGQWL---AQD----DFSGEYQADCVILAGNAVM-----PTIDAACKIARDQQIP-LLISGGIGHTGRAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLNQHTAIVVQDPTMQRRTMATFRRMTNPWLSYNADSVIQGLWPVERYLSLL-----TGELPRLRDDSDGYGPR-------GRDFIHVD
7	SP3	3ca8a	0.115	0.835	1.820	threading_7	-----------------------PFPTLSPATIDAINVIGQWLAQDDFSGEV--PYQADCVILAGNA-----VMPTIDAACKIARDQQI-PLLISGGIGHTGRAEATILADIAHQWHIPHEKIWIEDQSTNCGENARFSIALLRVHTAIVVQDPTMQRRTMATFRRMTPRWLSYPGFVPQLGNDSVIFINQLQGLWPVERYLSLL------TGELPRL-RDDSDGYGPRG
8	SAM-T99	3ca8A	0.129	0.739	1.848	threading_8	-----------------------PFPTLSPATIDAINVIGQWLAQDDFSG---EVPQADCVILAGNAVMPTI-----DAACKIARDQQIP-LLISGGIGSTTFAEATILADIAHQFHIPHEKIWIEDQSTNCGENARFSIALLRVHTAIVVQDPTMQRRTMATFRRMTGDNPDAPRDGYGPRGRDFIVHVDFPAEVIHAWQT----------------------------
9	MUSTER	1aq6A	0.123	0.917	0.663	threading_9	MIKAVV-VQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWGVTREALAYTL-LGLEPDESFLADMAQDAAQCLAE-PLKRAILSNGA-------PDMLQALVANAGLTDDAVISDAKRVF-PDSYALVEEVLGVTEVLFVSS--N-GFDVGGAKNFGFSVARVA-----RLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRRG
10	SPARKS	3h5oa	0.131	0.926	0.865	threading_10	TLTGIETVLDAAGQELQLLRAY---------LQHRPDGVLI-TGLSHAEPFERILSQHALPVVYDLADDGRCQEDAGAAITRHLLSRGKRRIGFLGAQLDERVKRLDGYRAALDAADCDAGLEWLDPQPSSQGADLDRALAERPDCDALFCCNDDLAIGALARSQQLGIADLQPAAWCTPPLTTVATPRRDIGVHAAKALLQLIDGEEPA--SRRADLGFRSSEG-----

Predicted Tertiary Structure


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TM-score=0.514 to 2d13A SCOP code=c.26.2.1	TM-score=0.502 to 2d13A SCOP code=c.26.2.1	TM-score=0.514 to 2d13A SCOP code=c.26.2.1	TM-score=0.504 to 2d13A SCOP code=c.26.2.1	TM-score=0.482 to 1xkqA SCOP code=c.2.1.2