Template-based Modeling Results for YGIV_ECOLI

Submitted Primary Sequence

>Length 160
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA
CCCCEEEEEEEEECCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHCEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA
5542211010121230100000120213101200120020034221222330200000111122122320100000101331343321010020220210001010213100200100022002312231441100100011242123310101000114
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA
1	MUSTER	1jyhA	0.227	0.938	3.215	threading_1	-----MNYEIKQEEKRTVAGFHLVGPEQTVKKGFEQLMMWVDSKNIVP---KEWVAVYYDNPDETPAEKLRCDTVVTVPGYFTLPSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDG--YWDIEMYVAVQ
2	SPARKS	1jyha	0.240	0.938	4.454	threading_2	-----MNYEIKQEEKRTVAGFHLVGPWETVKKGFEQLMMWVDSKNIVPKE---WVAVYYDNPDETPAEKLRCDTVVTVPGYFTENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDG--YWDIEMYVAVQ
3	PROSPECT2	1jyha	0.240	0.938	2.512	threading_3	M-----NYEIKQEEKRTVAGFHLVGPWQTVKKGFEQLMMWVDSKNIVP---KEWVAVYYDNPDETPAEKLRCDTVVTVPGYFTENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGY--WDIEMYVAVK
4	PPA-I	1jyhA	0.233	0.938	4.251	threading_4	-----MNYEIKQEEKRTVAGFHLVGPEQTVKKGFEQLMMWVDSKNIVP---KEWVAVYYDNPDETPAEKLRCDTVVTVPGYFTENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDG--YWDIEMYVAVQ
5	HHPRED-l	1jyh_A	0.248	0.931	5.375	threading_5	-----MNYEIKQEEKRTVAGFHLVGPWETVKKGFEQLMMWVDSKNIVP---KEWVAVYYDNPDETPAEKLRCDTVVTVPGYFPENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAED--GYWDIEMYVAV-
6	HHPRED-g	3b49_A	0.132	0.900	4.936	threading_6	----KRKPERIFVPE-NFL-VDGKGDPDEYQKAVQSLYAIAYTIK----GETRLEGFWWEGKDLKDRDAWLWTSILRQPDFVTEDTSRVKLVRFEEGECVQ--HVGPFSEEVHTVAE-H-QF-ETEGLRNDTRKHHEIYLSDPRKANPEK-KTILRLPVS
7	SP3	1jyha	0.247	0.938	4.622	threading_7	-----MNYEIKQEEKRTVAGFHLVGPWETVKKGFEQLMMWVDSKNIVPKE---WVAVYYDNPDETPAEKLRCDTVVTVPGYFPENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDG--YWDIEMYVAVQ
8	SAM-T99	1jyhA	0.240	0.938	5.423	threading_8	-----MNYEIKQEEKRTVAGFHLVGPWEQVKKGFEQLMMWVDSKNIVP---KEWVAVYYDNPDETPAEKLRCDTVVTVPGYFTLPSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLN--NGAEDGYWDIEMYVAVQ
9	MUSTER	2kcuA	0.152	0.944	2.530	threading_9	MDECQFVCELKELAPVPALLIRTQTAMSELGSLFEAGYHLLAGQGKSP--SGPPFARYFGMSA----GTFEVEFGFPVEGGVEG-SGRVVTGLTPSGKAASSLYIGPYGE-IEAVYDALMKWVDDNGFDLSG-EAYEIYLDNPAETAPDQLRTRVSLMLH
10	SPARKS	1d5ya	0.132	0.994	3.584	threading_10	GEFTMPEHKFVTLEDTPLIGVTQSCSLEQISDFRHEMRYQFWHDGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALADQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERY-YPAEDDRPINLRCELLIPIR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.939 to 1jyhA SCOP code=d.60.1.3	TM-score=0.943 to 1jyhA SCOP code=d.60.1.3	TM-score=0.939 to 1jyhA SCOP code=d.60.1.3	TM-score=0.936 to 1jyhA SCOP code=d.60.1.3	TM-score=0.943 to 1jyhA SCOP code=d.60.1.3