Template-based Modeling Results for YGIQ_ECOLI

Submitted Primary Sequence

>Length 739
MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCEECCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR
5532222323331121231102011113101102310351313201000000101011100000000100232101000002031322310130031000000100001000120003332333121013222042122000000210241143100000001000110010111222012100120400000001012000100210222221220220331002043223202101223132213133122211322201333322334331210101124243233210100102203211210030020012221321120001211411011111122022310010130112221122223241211110100010021111100000000020322323223200210220232132110000001111011122303234233214322011131032132213100200220340322220000110211001212300320022200221310132023100231321222002201300220043114321000000010122223102200200341313131000010122110000111132322322232331212323311201100122222211210130032012320022243011223223324324433432432223323222343232223322223232232224342422238
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR
1	SPARKS	2qgqa	0.148	0.346	2.263	threading_1	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EE--RPYAYVKISDGCGSL-RSRSIEDITREVEDLLKE--GKKEIIL--VAQDTTSYGIDLYRKQA------------------------LPDLLRRLNSLNGEFWIRV-YLHPDHL---TEEIISALELDKVVKYFDVPVQHGSDKILKLGRTKSSEELKKLSSIRERF-----PDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDKVDPEAKRRQEELL------------------LLQAEISNSRLD--------------------RFVGKKLKFLVEGKEGKFLRTWTEAPEVDGVVFVRGKGKIGDHDEYDWGSVI----------------------
2	PROSPECT2	1w36B	0.092	0.924	1.807	threading_2	MSDVAELDPLRLPLQGELGLGGSAAFPRPLTVEEAELRGR----IRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQW----LLLAERQMDEAAVFT------IHGFCQRM-LNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREI--AQVVFETWKGPQALLRDINR--YLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEETNSYQLPESLEKPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRDSALRSESGEVRRIWHHQPETALLLVHAHYTLDTNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGESCGVGDTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDIS----------------------VLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFMTPERENTLRSALAEEFDGYRQIWRKRGVMPMLRALATAGGERRLTDILHISELLQEAGTQL---------------ESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQRVQEQAFYHDRHSFEAVLDLNAAPESVDLALLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDVSTAELNAKTLQRLPGDNWRVTSYSGLQQRGHPRLDVDAAGVASVVEEPTLTSAR
3	PPA-I	2qgqA	0.165	0.336	1.012	threading_3	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EERPYAYVKISDGC-------------GSLR-SRSIEDITREVEDLLKE--GKKEIILV--AQDTTSYGIDLYRKQ------------------------ALPDLLRRLNSLNGEFWIRVYL-HPDHL---TEEIISALELDKVVKYFDVPVQHGSDKILKLGRTKSSEELKKLSSIRERF-----PDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDKVDPEAKRRQEELL------------------LLQAEISNSRLDRFVGKKLKFLVEG---KEGKFLVGRTWTEAPEVDGVVFVRGKGKIGD-----------------------------------------------
4	HHPRED-l	2qgq_A	0.172	0.355	6.284	threading_4	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EERPYAYVKISDGC-------------GS-LRSRSIEDITREVEDLLKGKKEIILVAQDTTSYGIDLYR-----------------------------KQALPDLLRRLNSLNGEFWIRV-YLHPDHL---TEEIISA-LELKVVKYFDVPVQHGSDKILKL-GRT--KSSEELKK-LSSI-RERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSD---------------------------KVDPE-AKRRQEELL----------LLQAEISNSRLDRFVGKKLKFLVEGKEG---KFLVGRTWTEAPEVVVFVR--GKG-KIGDFLEVVIKEHDEY--D-WGSVI-----
5	PROSPECT2	1qbkb	0.075	0.901	1.563	threading_5	YEWQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSL------------------------SGLILKNNVKAHF------QNFPNGVTDFIKSEDSSPLIRATVGILITTIASKGELQNWPDLLPKLCYNTCEGAFGALQKICEDSAEILDSDRPL---NIIPKFLQFFKHSSPKIRSHAVACVNQFIIS---RTQALLHIDSFTENLFALAGDEEPEVRKNVCRALVLLEVRMDRLLPHHNIVEYLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGKYSDIDIILLKG-----------DVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDDDDDDEIDDDDTISDWNLR----------KCSAAALDVLANVYRDELLPHILPELLFHHEWVVKESGILVLGAIAEGCQGLIQCLSDKKALVRSITCWHWVVSQPPDTYLKPLTELLKRILDSNKRVQEFATLEEEACTELVVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQLPPLIQKWNLKDEDKDLFPLLECLSSVATA--------------LQSGFLPYCEPVYQRCAQALNNAQPDQYEAPDKDFIVALDLLSNIEQLVARSNILTLYQCQDKPEVRQSSPILGTNLNPEFISVCNNATWA--IGEISIQGIEQPYIPVLHQLVEIINRPNTPKYVCPQEVAPLQQFRNIRDNEEKDCTISVNPSASWINPKDDLRDFG
6	HHPRED-g	2qgq_A	0.179	0.355	3.309	threading_6	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EERPYAYVKISDGC-------------GS-LRSRSIEDITREVEDLLKE--GKKEII--LVAQDTTSYGIDL----------------Y--------RKQALPDLLRRLNSLNGEFWIRV-YL-HPD--HLTEEIISA-LELDVVKYFDVPVQHGSDKILKL-GRT--KSSEELKK-LSSIRER-FPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSD-------------------------KVDE-AKRRQEELLLLQ-------------AEISNSRLDRFVGKKLKFLVEGK--EG-KFLVGRTWTEAPEVDGVVFVRGKG---KIGDFLEV------VI-KEHDEYD-WGS
7	SP3	2qgqa	0.169	0.336	1.821	threading_7	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EE--RPYAYVKISDGCGSLR-SRSIEDITREVEDLLKE--GKKEIIL--VAQDTTSYGIDLYRKQA------------------------LPDLLRRLNSLNGEFWIRV-YLHPDHL---TEEIISALELDKVVKYFDVPVQHGSDKILKLGRTKSSEELKKLSSIRERF-----PDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDKVDPEAKRRQEE----LL--------------LLQAEISNSRLD--------------------RFVGKKLKFLVEGKEGKF---LVGRTWTEAPEVDGVVFV---------------------------RGKGKIGD
8	PROSPECT2	1foha	0.090	0.755	1.423	threading_8	TKYSE-------------------------------------SYCDVLIVGAG-----PMAARVLSEYVRQKPDLKVRIIDKRSTKVYDKILSEANDMSTIALYNPD---------ENGHIRRTDRIPDTLPGISRYHRIERHILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTM------TLRYMSDHE------------------------------------STPLQFGHKTENSLFHSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHS--------------------WVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIRS----------------------------------RCAIHSAESGSIMIIPRENNLVQLQFTPEVVIANAKKIFHPYTFDVQQLDWFTAYHIGQRVTE-------KFSKDERTHSPKAGQGMNTSMMDTYNLGWKLGLVLT-------GRAKRDILKTYEEERHAFAQALI---------DFDHQFSRLFADEMGVSMDVFKEAFVKGNEFASGTAINYDENLVTDKKSSKQELA--------KNCVVKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVF---AGKATDATQMSRIKKFSAYLDSENSVISLYTPKVSDRNSRIDVITIHSCHRDDIEMHDFPAPALHPKWQYDFIYADCDSWHHPHPKETKGSGILVEPKEKSGAQTEADWTKS
9	SAM-T99	2qgqA	0.149	0.355	5.538	threading_9	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------E------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ER--------PYAYVKISDGC-------------GSL-RSRSIEDITREVEDLLKEGKKEIILV----AQDTTSYGIDL------------------------YRKQALPDLLRRLNSLNGEFWIRVY-LHPDHL---TEEIISALELDKVVKYFDVPVQHGSDKILKLGRTKSSEELKKLSSIRERF-----PDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDKVDPEA----------------------------KRRQEELLL----------LQAEISNSRLDRFVGKKLKFLVEGKEGKFLGRTWTEAPEVDGVVFVRGKGK--IGDFLEVVIKEHDEYDWG--------------
10	SPARKS	3iixa	0.153	0.451	1.430	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTGREILEKLERR---------EFTREVLKEALSINDRGFNEALFKRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRTPEEIVERARLAVQF--GAKTIVLQ-SGED-------------------------------PYMPDVISDIVKEIKKM-GV-AVTLSLGEW------PREYYEKWKEAGADRYLLRHE--TANPVLHRKLRPDT-SFENRLNL--LTLKELG--YETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDT-----------PLANEK--------KGDFTLTLKMVALTRILLPDPATTAMGTIVPGGREITLRCGANVIMPNWTPSPYRQLYQLYPGKICVFEKDTACIPVMKMELLGRKPGRDWGGRKRVFET---------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.339 to 1xfdA SCOP code=b.70.3.1	TM-score=0.427 to 1sjaA SCOP code=c.1.11.2	TM-score=0.538 to 1w36E SCOP code=c.37.1.19	TM-score=0.423 to 1jpmA SCOP code=c.1.11.2	TM-score=0.447 to 2hyiI SCOP code=c.37.1.19