Template-based Modeling Results for YGIM_ECOLI

Submitted Primary Sequence

>Length 206
MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASVQLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKRKDRWMN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASVQLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKRKDRWMN
CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASVQLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKRKDRWMN
55312100000000000000223231100010000012131221100010221220200222333210002133132000113202323223221230232032113212412322223123123312303321311343144134212202421210122123312110020022000000000000000120133344444225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASVQLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKRKDRWMN
1	PROSPECT2	1pieA	0.068	1.000	1.043	threading_1	TVLSALTEKFSNYVKGMIVMLKGAGYEIDKGFELLIKGEIPTASDQFAIGFGEVKKAIELDCNTLKYEMVPVELRDYDIVIMNTNKPRALTESKYNERFAETREALKRMQTRLDIQSLGELSNEEFDANTDLIGDETLIKRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHAEVTGLELDTLAETAQKQLVAHDNEEVVGYP
2	PROSPECT2	2nxoA	0.107	0.956	1.040	threading_2	IQFLNCLPLYWGLPVTLVEFLKNADDLVAFPDIAVGCDGPVMSCVIVSQVPDGARVALLSERFGVQPDYYTCPPDL---------SLMAAVLIGDAALRANMIDGPRYGLDVHDLGALWKEWTRDYAEREPVITRKVHEAFLASRNLSLEEVEKVAEQAARWEAFDEDTLAKYFTTLPQLEAVTEFARRVGPTGFPADVKVELLKP
3	SPARKS	2kt8a	0.171	0.369	1.631	threading_3	---------------------AEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGE--EGAFYKIEYK-GSHGYVAKEYIKDIKDE-----VLEHHHHHH-----------------------------------------------------------------------------------------------------
4	PROSPECT2	1omia	0.081	0.840	1.036	threading_4	GSEFKKYLE----------TNGIKPKFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGETSVGYYNLEVISEQATAYVIKINELKE---LLSKNLTHFFYVFQTLQKQVS----YSLAKFNDFSINGKLGSICGQLLILTYVYMQELSAVSRIISKLKQEQNLDYLKRYAPKLDEWFYLACPATW----------------GKLN
5	PPA-I	2krsA	0.167	0.320	1.765	threading_5	-----------------------MQGVVKVNSALNMRSGPGSNYGVIGTLRNNDKVEIIKEV--DGWYEIRF-NGKVGYASKSYIEHHHHHH------------------------------------------------------------------------------------------------------------------
6	HHPRED-l	3npf_A	0.112	0.825	1.667	threading_6	-------------QEIRP-PADSAYGVVHIS-VCNLREEGKFTSG-STQALLG-PVKVLQY--NG-WYEIQTPDDYTGWVHR-VITP-SKER--YDEWNRAKIVVTSHYGFAYEKPDESDVVAGNRVSYPDGRLSISQPEAGWRASLKQDVESIIETAYS--GIP--------YLWAGLVRTVLF-HDIIIPRDASQAYHIDFSV-
7	HHPRED-l	2kt8_A	0.145	0.369	1.930	threading_7	---------------------AEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGE--EGAFYKIEY-KGSHGYVAKEYIKDIKDEVLEHHHHHH----------------------------------------------------------------------------------------------------------
8	SPARKS	3pvqa	0.151	0.835	1.146	threading_8	VHR------VITPSKEKYDEWNRAEKIVVTSHYGFTYEKPDDDSQTVSDVVAGNRLKWEGS--KGHFYKVSYPDGRQAYISRHISQPESKWRASLKQDAESIIKTAYTIKGVDSGLVRTVASQQAYVGERIEIAPDFS--------------------NVQRGD----LVFATADRKEGISHVGIYLGFI--HALGDVHDPEDEYD
9	HHPRED-g	2kt8_A	0.145	0.369	1.788	threading_9	---------------------AEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGE--EGAFYKIEY-KGSHGYVAKEYIKDIKDEVLEHHHHHH----------------------------------------------------------------------------------------------------------
10	PPA-I	2wpqA	0.091	0.481	1.317	threading_10	---------------------------------------------------------------------------------------MKQIEDKIEEILSKIYHIENEIARIKKLIFDTNEKVDQNTADITTNTNSINQNTTDIATNTTNINNLSDSMKQIE-DKIEEILSKIYHIENEIARIKKLI-------------------

Predicted Tertiary Structure


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TM-score=0.478 to 1c9bA SCOP code=a.74.1.2	TM-score=0.583 to 1pieA SCOP code=d.14.1.5	TM-score=0.696 to 2nxoA SCOP code=c.94.1.1	TM-score=0.464 to 1griA SCOP code=b.34.2.1	TM-score=0.713 to 2bgcB SCOP code=a.4.5.4