Template-based Modeling Results for PLSY_ECOLI

Submitted Primary Sequence

>Length 205
MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE
CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE
2200000000000001000000000100122102211121100110011001000000000100100000000110001200000000000000000000113102000000000000001000000000000000000000000000000000000010100000000000000200310120134332323232344444448
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE
1	SPARKS	2bkub	0.079	0.985	1.006	threading_1	NAAAQLIAAIADIELPHGAWPELMKIMVDNTG---AEQPENVKRASLLALGYMCESADALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEAEDIEVQAAAFGCLCKIMSKYYTMKPYMEQALYALTIATMKNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKD
2	PROSPECT2	1pw4A2	0.071	0.893	1.232	threading_2	LPNKLLWYIAIANVFVYLLRYGILDWSPTY--LKEVKHFALDKSSWA------YFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI--ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHATAAGFTGLFGYLGGSVAASAIVGYTVDFMIGGSILAVILLIVVMIGEKRRH------------EQLLQELVP
3	PPA-I	1pw4A2	0.108	0.810	1.036	threading_3	FALDKSSWAYFLYEYAGIPGTLLCGWMS----DKVFRGN----------------RGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIG-FLIYGP------VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP------------
4	PROSPECT2	3ibvA1	0.122	1.000	1.212	threading_4	MSAQDVENAVEAALDPSVGPIIFIGSLRSSSTCHEIFSEKTKYKPSTRLICLQTLSEKVELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYPSNWNDFFASLQGVIAASSQSEFSNFYLKVLLSIGAIRANDMSDIVSFVYEMMLAYSNAKNYGTVGLCLQVYAQWVNEPCMNLLYSFLQIEVNKKMKPLEKLNSK
5	PROSPECT2	1oyzA	0.093	1.000	1.183	threading_5	NSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIQIKICKKCEDNVFNILNRATAIESTAQIYSPKIVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELDIIEAAGELGDKTLLPVLDTLYKFDDNEIITSAIDKKRS
6	PROSPECT2	2qk2A	0.078	0.941	1.177	threading_6	TLRKESLEVLEKLLTDHYGALVALKKVITKDSNVVLVAAGKCLALLAKGLAKR------FSNYASACVPSLLEKFKEKKPNVVTALREAIDA------IYASTSLEAQQESIVESLSNKNPSVKSETALFIARALTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKDKAVTPLLADVDPLKAKQEKAEIKIKVA
7	PROSPECT2	2of3A	0.071	0.961	1.143	threading_7	APTDEHISQLQTLLGNQAKVSLM--SQLFHKDFKQLRFFETNPAALIKVLELCKVIVELIRDEVSAFVPYLLLKTGEAKDNMRTSVRDIVNV------LSDVVGPLKMTPMLLDALKSKNARQRSECLLVIEYYITNAGISPLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEDQMWKAAGRMADKDKSLVEERIKRTGV
8	MUSTER	3orgA	0.158	0.956	0.785	threading_8	SRLAGRFAGYILYVVSGVALCLLSTFWCAVLSTEAEGS---GLPQMKSILGFYDKMALELRVLFAKALGLICAIGGGLP-WEGPNVHIACIIAHQFYRLGVFKELCAAACAVGLASSFGAPLGGVLYSIETIAVQAFWKGVLSALSGAIVYELDVSRTQTLLYAILGALMGVLGALFIRCVRSIY-----ELRMRHYPGTNRYFL
9	SPARKS	3zxpa	0.065	0.971	0.909	threading_9	QQDAVFELISMGFNVALW-YTKYASRLAGKENITED-----EAKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLERLIEAYVIQCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHLF
10	PROSPECT2	1r2fA	0.110	0.976	1.125	threading_10	IQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHE---EAVLSNISFMEAVHARSYSSIFSTLCQRKAQIILAHYVSDEPLKKKIASVFLESFLFLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALIEREELKLFALDLLMELYDNEIRYTEALYVNDVKAFLCYNANKALMNL--GYEALFPPEMADVLAALSP

Predicted Tertiary Structure


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TM-score=0.810 to 1pw4A SCOP code=f.38.1.1	TM-score=0.705 to 1qgkA SCOP code=a.118.1.1	TM-score=0.790 to 1pw4A SCOP code=f.38.1.1	TM-score=0.755 to 1pw4A SCOP code=f.38.1.1	TM-score=0.705 to 1wa5C SCOP code=a.118.1.1