Template-based Modeling Results for YGIF_ECOLI

Submitted Primary Sequence

>Length 433
MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVAVDGSQIEIALDQGEVKAGEFAEPICELELELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAISLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKISDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQGLHHAIATGQRIEIEHFRNEANNQEPFWLHSGKR
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVAVDGSQIEIALDQGEVKAGEFAEPICELELELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAISLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKISDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQGLHHAIATGQRIEIEHFRNEANNQEPFWLHSGKR
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHHHHCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHCCEEEEEEEEEEEEEEECCCCEEEEEEEECCEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVAVDGSQIEIALDQGEVKAGEFAEPICELELELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAISLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKISDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQGLHHAIATGQRIEIEHFRNEANNQEPFWLHSGKR
4521210112023200310231032121333220201000010221102212000001123330100020224232113322111021232222122022311120200110223111001010211111022321201000120202224223200101010132323101200220032121232210101101111212213313222223122413132001000210011011013011322320122012001001200210220023421230221012012202211101200211200001000020012221222232311120121022001200221012022112321132022002201200000100011023210210131010002001212222012013212322211132244
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVAVDGSQIEIALDQGEVKAGEFAEPICELELELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAISLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKISDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQGLHHAIATGQRIEIEHFRNEANNQEPFWLHSGKR
1	MUSTER	3e0sA	0.106	0.499	1.030	threading_1	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQLDAHASIHENVRRLLQFTTSIMEANEEGIRKDDSEFLHDFRVAIRRSRSILRLLNGVFDPEKTAWMLAGLRELGKRTNDLRDSDVYLLRREYSGFMTSLKEFIAEGELPDPETAPLAAE---PTGDVAAKTIRKALKKVLVHGR--SDAELHELRIDCKKLRYLLEFFASLFPPKATAQVLRQMKTLQDNLGTFVDLTVQMEFLQSRLETISEAAAIGG
2	SAM-T99	3sy3A	0.217	0.383	4.131	threading_2	-EIEIEFKNIVTEEEFHALCKSF-----SIEVFTKQVNHYFETPNSSLKEAGSALRIRHKGETYTLTLKQPAEV--GLL---ETHQVVTNEAKETNVIISGAVNQLCKLQIPVSALT-YGSLTTERAETLFEGG----TLVFDHSF----YYNHDDYEIEFEVQ--DEETGKAAFIHLLKQHNIPIRH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	SPARKS	3e0sa	0.116	0.499	1.083	threading_3	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQLDAHASIHENVRRLLQFTTSIMEANEEGIRKDDSEFLHDFRVAIRRSRSILRLLNGVFDPEKTAWMLAGLRELGKRTNDLRDSDVYLLRREYSGFMTSLKEFIAEGEL---PDPETAPLAAEPTGDVAAKTIRKALKKVLVH--GRSDAELHELRIDCKKLRYLLEFFASLFPPKATAQVLRQMKTLQDNLGTFVDLTVQMEFLQSRLETGGLLTTLYR
4	PROSPECT2	3e0sA	0.111	0.499	1.874	threading_4	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQLDAHASIHENVRRLLQFTTSIMEANEEGIRKDISEFLHDFRVAIRRSRSILRLLNGVFDPEKTAWMLAGLRELGKRTNDLRQFCRYLTGREYSGFMTSLKEFIAEGELPDPETAPL---AAEPTGDVAAKTIRKALKKVLVH--GRSDAELHELRIDCKKLRYLLEFFASLFPPKATAQVLRQMKTLQDNLGTFEAAAIGGLLTTLYRKREKVREHTGL
5	PROSPECT2	2gfgA	0.188	0.430	1.674	threading_5	GGKEIERKTLVSKETFKRLISQL---HIGEGDFKLQRNHYFETDDFQLKKQSSALRIREKEAIFTFTLKQPHP-AGLLETNQTLSKQEAKLALESAHFPSGEVDALRDLSIPISQLKHIGTLSTSRAEISYEQ----GILCLDHSSY------LGIEDYEIEFEGTSEEHATVTFQEILKTFSIQVPTENKIQRFFSK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KE
6	PPA-I	3e0sA	0.106	0.499	1.553	threading_6	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQLDAHASIHENVRRLLQFTTSIMEANEEGIRKDDSEFLHDFRVAIRRSRSILRLLNGVFDPEKTAWMLAGLRELGKRTNDLRDSDVYLLRREYSGFMTSLKEFIAEGELPDPETAPLAA---EPTGDVAAKTIRKALKKVLVH--GRSDAELHELRIDCKKLRYLLEFFASLFPPKATAQVLRQMKTLQDNLGTFVDLTVQMEFLQSRLETISEAAAIGG
7	PPA-I	2gfgA	0.203	0.420	1.408	threading_7	KEIEIERKTLVSKETFKRLISQLH---IGEGDFKLQRNHYFETDDFQLKKQSSALRIREKEAIFTFTLKQPHPA-----GLLETNQTLSKQEAKLALEPSGEVDALRDLSIPISQLKHIGTLSTSRAEISYEQ----GILCLDHSSYLG------IEDYEIEFEGTSEEHATVTFQEILKTFSISQPTENKIQRFFSKKE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	HHPRED-l	3e0s_A	0.112	0.494	6.045	threading_8	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQLDAHASIHENVRRLLQFTTSIMEANEEGIRKDDSEFLHDFRVAIRRSRSILRLLNGVFDPEKTAWMLAGLRELGKRTNDLRDSDVYLTGREYSGFMTSLKEFIAEGELPDPETA---PLAAEPTGDVAAKTIRKALKKVLVHGR--SDAELHELRIDCKKLRYLLEFFASLFPPKATAQVLRQMKTLQDNLGTFVDLTVQMEFLQSRLETI-GLLTKR-
9	HHPRED-l	2gfg_A	0.196	0.425	5.452	threading_9	-GIEIERKTLVSKETFKRLISQLH---IGEGDFKLQRNHYFETDDFQLKKQSSALRIREKEAIFTFTLKQPHPA-GLLETNQTLSKQEAKLALESAHFPSGEV-DALRDSIPISQLKHIGTLSTSRAEISYEQ----GILCLDHSSYLG----IEDYEIEFEGTSEE--HATVTFQEILKTFSISQPTENKIQRFFSKKE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	HHPRED-g	3e0s_A	0.111	0.499	5.000	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQLDAHASIHENVRRLLQFTTSIMEANEEGIRKDDSEFLHDFRVAIRRSRSILRLLNGVFDPEKTAWMLAGLRELGKRTNDLRDSDVYLTGREYSGFMTSLKEFIAEGELPDPETA---PLAAEPTGDVAAKTIRKALKKVLVHGR--SDAELHELRIDCKKLRYLLEFFASLFPPKATAQVLRQMKTLQDNLGTFVDLTVQMEFLQSRLETIAGLLTTLY

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.480 to 1tqgA SCOP code=a.24.10.3	TM-score=0.481 to 1tqgA SCOP code=a.24.10.3	TM-score=0.516 to 1yemB SCOP code=d.63.1.2	TM-score=0.474 to 1tqgA SCOP code=a.24.10.3	TM-score=0.533 to 1yemB SCOP code=d.63.1.2