Template-based Modeling Results for YGIC_ECOLI

Submitted Primary Sequence

>Length 386
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECHHHHHHHCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE
54222223332132102310020111221311011000201121023023002200300120033002132002303013200200131123321100000000011312010010103001001000100110021012112223123211200120030012014312232000001332121100020011002304020100002201013311001233120100030000110012100210331211101000110010100010002002322100211123333232321010001133122010022121022232312321100010030142232100000000211000000121422013310200000014
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE
1	MUSTER	2iobB2	0.274	0.917	2.793	threading_1	GARLENKGQFDWLDEKDPLQNAYVQANGQVINQDYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRHHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGYKGN----GFNPAEGLINELAGAWKHS---RARPFVHIMQD-KDIEENYHAQFMEQALHQAGFETRILRLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIIDLVK-----------------------NIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVK
2	SPARKS	2io7a	0.262	0.969	8.099	threading_2	ISGARLENKGKWLDEKDPLQNAYVQANGQVINQDYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQG----YKGNGFNPAEGLINELAGAWKH----SRARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLI---
3	PROSPECT2	2io7A	0.259	0.969	4.680	threading_3	RLENKGQFDGKWLDEKDPLQNAYVQANGQVINQDPHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRHHMITGRMDFCMDE-RGLKVYEYNADSASCHTEAGLILERWAEQG----YKGNGFNPAEGLINELAGAWKH----SRARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILRLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQIRIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEELDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLI---
4	PPA-I	2iobB2	0.266	0.917	5.923	threading_4	RLENKGQFDGKWLDEKDPLQNAYVQANGQVINQDPYYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRHHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGYKGN----GFNPAEGLINELAGAWKHS----RARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILRLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIIDLVK-----------------------NIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVK
5	HHPRED-l	2io8_A	0.269	0.974	9.256	threading_5	GARLENKGDGKWLDEKDPLQNAYVQANGQVINQDYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGYK----GNGFNPAEGLINELAGAWKH---SRARPFVHIMQD-KDIEENYHAQFMEQALHQAGFETRILRLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEELDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVV-
6	HHPRED-g	2io8_A	0.268	0.977	8.957	threading_6	LLKIRLENKGKWLDEKDPLQNAYVQANGQVINQDYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGY----KGNGFNPAEGLINELAGAWKHSR---ARPFVHI-MQDKDIEENYHAQFMEQALHQAGFETRILRLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEELDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVK
7	SP3	2io7a	0.265	0.969	7.768	threading_7	ISGARLENKGKWLDEKDPLQNAYVQANGQVINQDYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGYK-------GNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDI-EENYHAQFMEQALHQAGFETRILGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLI---
8	SAM-T99	2iobB2	0.274	0.889	6.475	threading_8	-----------WLDEKDPLQNAYVQANGQVINQDPYYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRHHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGYKGNGFNPAEGLIN----ELAGAWKHSRAR----PFVHIMQDKDIEENYHAQFMEQALHQAGFETRILGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPI-------IDLV----------------KNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVK
9	MUSTER	2vpsA2	0.266	0.904	2.713	threading_9	LRRLPTESKANWLDMNNPAERLFVEEFGVVS-----YYESNHEFHLRCVAYGTQLHAIFMEATAQVIESDEKLRLFAIPEEFWPRIRHSWKYQQTYISGRFDFAFNNEGEVKCFEYNADSASTLLECGLIQQKWAESVGLDKQDT--RGSGFAVERNLKMAWANS---GATGRVHFCV-DEEREEQYTALYCMQAAEAVGLEGKLCIFDEFRFDDNGHVVDSDGVRVRNVWKTWMWESAITDYYAAREERGEILYFEPMWKVIPSNKAILPMIYHNHPEHPAILKAEYELTDELRKHGYAKKPIVN--------------------------MIYQQLFELKKQDDYYAIIGGWMIGDAFSGTGIREDKSVITGVDSPFAAVRIKT
10	SPARKS	2voba	0.263	0.896	6.995	threading_10	RNFLPTESKANWLDMNNPAERLFVEEFGMV-----SYYESNHEFHLRCVAYGTQLHAIFMEATAQVIESDEKLRLFAIPEEFWPRIRHSWKYQQTYISGRFDFAFNNTGEVKCFEYNADSASTLLECGLIQQKWAESVGLDKQDTRGSG--FAVERNLKMAWANS---GATGRVHFCV-DEEREEQYTALYCMQAAEAVGLEGKLCLFDEFRFDDNGHVVDSDGVRVRNVWKTWMWESAITDYYAAREERGEILYFEPMWKVIPSNKAILPMIYHNHPEHPAILKAEYELTDELRKHGYAKKPIVNM--------------------------IYQQL--FEKQDDYYAIIGGWMIGDAFSGTGIREPFAAVRIKTD-KLPHPVTL

Predicted Tertiary Structure


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TM-score=0.892 to 2iobB SCOP code=c.30.1.7	TM-score=0.848 to 2iobB SCOP code=c.30.1.7	TM-score=0.877 to 2iobB SCOP code=c.30.1.7	TM-score=0.879 to 2iobB SCOP code=c.30.1.7	TM-score=0.895 to 2iobB SCOP code=c.30.1.7