Template-based Modeling Results for YGHX_ECOLI

Submitted Primary Sequence

>Length 278
MTITLTGKSRNVSSSTLRRSAVGGMTALALFDLLKPNYALATQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADVAKIEAPLLLHFAELDTRINEGWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTITLTGKSRNVSSSTLRRSAVGGMTALALFDLLKPNYALATQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADVAKIEAPLLLHFAELDTRINEGWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTITLTGKSRNVSSSTLRRSAVGGMTALALFDLLKPNYALATQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADVAKIEAPLLLHFAELDTRINEGWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS
44112223231201200110000000000000101011010231322233010110202024130202000011342324000000001031012101200320051001000000112221222223202201320212200200100020025223121200000001000000000121220000000002212223123130000000022124023101200200332432010000110200010211231132001200210121024215
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTITLTGKSRNVSSSTLRRSAVGGMTALALFDLLKPNYALATQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADVAKIEAPLLLHFAELDTRINEGWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS
1	MUSTER	1zi8A	0.250	0.806	2.336	threading_1	--------------------------------------------------MLTEGISIQSYDGH-TFGALVGSPAK--APAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASK-GYVDRAVGYYGVGLELNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQS
2	SPARKS	1din_	0.260	0.802	3.529	threading_2	--------------------------------------------------MLTEGISIQSYDGH-TFGALVGSPA--KAPAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY-VDRAVGYYGVGKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAP-LQ
3	PROSPECT2	3f67A	0.281	0.806	3.535	threading_3	NAI--------------------------------------------------IAGETSIPSQG-ENPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGVDIAVDLNAPVLGLYGAKDASIPQDTVETRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRLAWFAQ---Y
4	PPA-I	1zi8A	0.250	0.806	2.696	threading_4	--------------------------------------------------MLTEGISIQSYDGH-TFGALVGSPAK--APAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASK-GYVDRAVGYYGVGLELNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQS
5	HHPRED-l	1zi8_A	0.232	0.806	2.035	threading_5	--------------------------------------------------MLTEGISIQSYDGH-TFGALVGSPAK--APAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGYVDRAVGYGVGLEKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQ-
6	HHPRED-g	3f67_A	0.305	0.802	2.341	threading_6	------------------------------------------------NAIIAGETSIPSQG--EN-PAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAAVAWYGKLHPVDIAVDLNAPVLGLYGAKDASIPDTVET-RQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQR-LAWFAQY--
7	SP3	1din_	0.265	0.802	3.687	threading_7	--------------------------------------------------MLTEGISIQSYDGH-TFGALVGSPAK--APAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY-VDRAVGYYGVGLQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAP-LQ
8	SAM-T99	3f67A	0.308	0.806	5.892	threading_8	------------------------------------------------NAIIAGETSIPS-QGE--NPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAAVAWYGKLPPVDIAVDLNAPVLGLYGAKDASIPQDTVETRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQR-LAWFAQY--
9	MUSTER	3f67A	0.308	0.806	2.264	threading_9	------------------------------------------------NAIIAGETSIPS-QG--ENPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVPVDIAVDLNAPVLGLYGAKDASIPQDTVETRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRL-AWFAQY--
10	SPARKS	3f67a	0.312	0.806	3.428	threading_10	------------------------------------------------NAIIAGETSIPS---QGENPAYHARPKNADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAAVAWYGKLHPVDIAVDLNAPVLGLYGAKDASIPQDTVETRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRLA-WFAQY--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.675 to 2i3dB SCOP code=c.69.1.36	TM-score=0.677 to 2i3dB SCOP code=c.69.1.36	TM-score=0.684 to 2i3dB SCOP code=c.69.1.36	TM-score=0.695 to 2i3dB SCOP code=c.69.1.36	TM-score=0.675 to 2i3dB SCOP code=c.69.1.36