Template-based Modeling Results for YGHT_ECOLI

Submitted Primary Sequence

>Length 230
MQSITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNVDLEVACARKPDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDFMTARGYH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQSITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNVDLEVACARKPDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDFMTARGYH
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQSITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNVDLEVACARKPDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDFMTARGYH
55422110000100311111100220020025213222012133223102002311221320231023222322442201100000000002111103201201440100000211223110102022022211002001101111230022121230100000102131003232333232013101101101222220010103211320022013001200223234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQSITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNVDLEVACARKPDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDFMTARGYH
1	MUSTER	3lv8A	0.210	0.870	2.253	threading_1	----NAKFIVIEGLEGAGKSTAIQVVVETLQQNGIDH-ITRTREPGG------------TLLAEKLRALVKEEHPGEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSS--QAYQGGGRQIAPSTMQSLKQTALG---------DFKPDLTLYLDIDPKLGLERELKMDISFFERARERYLELANSDDSVVMIDAAQSIEQVTADIRRALQDWLSQVN--
2	SPARKS	2wwfa	0.206	0.865	3.791	threading_2	MTDKKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVE-VKHLYFPNRE------------TGIGQIISKYLKMENSMS----NETIHLLFSANRWEHMNEIKSLLLKGIWVVCDRYAYSGVAYSSGALNLN--------KTWCMNPDQ------GLIKPDVVFYLNVPPNYAQNRSDIYEKVETQKKIYETYKHFAHEDYWINIDATRKIEDIHNDIVKEVTKIKVEPEEF
3	PROSPECT2	3lv8A	0.210	0.870	2.533	threading_3	----NAKFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPG-------------GTLLAEKLRALVKEEHPGEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPS-----TMQSLKQTA------LGDFKPDLTLYLDIDPKLGLERELDMDISFFERARERYLELANSDDSVVMIDAAQSIEQVTADIRRALQDWL--SQVN
4	PPA-I	3lv8A	0.200	0.870	2.710	threading_4	----NAKFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPG-------------GTLLAEKLRALVKEEHPGEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIA-----------PSTMQSLKQTALGDFKPDLTLYLDIDPKLGLERELDMDISFFERARERYLELANSDDSVVMIDAAQSIEQVTADIRRALQDWLSQVN--
5	HHPRED-l	2v54_A	0.167	0.835	2.001	threading_5	--MSRGALIVFEGLDKSGKTTQCMNIMESI--PANTIKYLNFPQSTVTGKMIDDYLTRKKT------------------YNDHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAA-KGASMT--------LSKSY------ESGLPKPDLVIFLESGSKEINRNVGEEIYETFQQKVLQEYKKMIEEIHWQIISSEFEEDVKKELIKNIVIEAIHTVTG-
6	HHPRED-g	4tmk_A	0.184	0.852	2.709	threading_6	----RSKYIVIEGLEGAGKTTARNVVVETLEQLGIDMVF-----TREPG---------GTQLAEKLRSLLLDIKDEVITDKAEVLMFY-AARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLAT-----------LRDAVLGDFRPDLTLYLDVTPEVGLKRRIEQESFDFFNRTRYLELAAQDK-SIHTIDATQPLEAVMDAIRTTVTHWVKEL---
7	SP3	2wwfa	0.201	0.865	3.880	threading_7	MTDKKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHL-----YFPN---------RETGIGQIISKYLKMENSM---SNETIHLLFSANRWEHMNEIKSLLLKGIWVVCDRYAYSGVAYSSGALNLN--------KTWCMNPDQ------GLIKPDVVFYLNVPPNYAQNRSDIYEKVETQKKIYETYKHFAHEDYWINIDATRKIEDIHNDIVKEVTKIKVEPEEF
8	SAM-T99	2ccgA	0.221	0.826	3.134	threading_8	-----SAFITFEGPEGSGKTTVINEVYHRL-VKDYDVIMTREPGGVPTGEEIRKIVLEG------------------NDMDIRTEAMLFAASREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEV--------RALN---EFAINGLYPDLTIYLNVSAEVGRERRLDQEDLKFHEKVIEGYQEIIHSQRFKSVNADQPLENVVEDTYQTIIKYLE-----
9	MUSTER	4tmkA	0.211	0.865	2.151	threading_9	----RSKYIVIEGLEGAGKTTARNVVVETLEQLGIRD-MVFTREPGG------------TQLAEKLRSLLLDIKGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLST--QAYQGGGRGIDQHMLATLRDAVLG---------DFRPDLTLYLDVTPEVGLKRARQESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKEL---
10	SPARKS	4tmka	0.206	0.865	3.317	threading_10	----RSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPG-------------GTQLAEKLRSLLLDIKSDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGID-----------QHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARQESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKEL---

Predicted Tertiary Structure


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TM-score=0.877 to 4tmkA SCOP code=c.37.1.1	TM-score=0.863 to 4tmkA SCOP code=c.37.1.1	TM-score=0.840 to 1e2fA SCOP code=c.37.1.1	TM-score=0.873 to 4tmkA SCOP code=c.37.1.1	TM-score=0.879 to 4tmkA SCOP code=c.37.1.1