Template-based Modeling Results for YGHE_ECOLI

Submitted Primary Sequence

>Length 286
MIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMACDAQRVICRIDECRGWSAGLALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQILHLQLRAANFASFDKLRSVLATDYVVQQDALQKEGDAVSGGVTLRRK
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMACDAQRVICRIDECRGWSAGLALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQILHLQLRAANFASFDKLRSVLATDYVVQQDALQKEGDAVSGGVTLRRK
CCCHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEECCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMACDAQRVICRIDECRGWSAGLALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQILHLQLRAANFASFDKLRSVLATDYVVQQDALQKEGDAVSGGVTLRRK
5432310220030033130211000010000102222031220001133020000122001100311133332321000101223322212213234121001100111221302002122323222232002010000000000000002200201101211230232012102310233441221211012003513432332300100110020032221231202001024433101010202212002301211342120123213432211201022356
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMACDAQRVICRIDECRGWSAGLALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQILHLQLRAANFASFDKLRSVLATDYVVQQDALQKEGDAVSGGVTLRRK
1	PROSPECT2	1psza	0.075	0.839	1.159	threading_1	KKDTTSIADITKNIAGDKIDLHSIVPEYEPLPEDVKKTSEADLIFYNGINLE-----TGGNAWFTKLVENAKKTENKDYFAVSD--------------------------GVDVIYLEGQNEKGKEDPHAWLNLENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKYFSKAYGIWEINTEEEGTPEQIKTLVEKLRQTKVPSL---------------FVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGKEGDSYYSAK
2	PROSPECT2	2fnaA	0.077	0.818	1.143	threading_2	FDREKEIEKLKGGINELNLPYIYLDLRKFELPSLLKALKNIQGIVIGNEIKFNRLSFANLLESFEQASKDNDNLKRIKFISGSEGLLYDYLRVEDPESPLAIEFLRRGFQEADIDF-----------KDYEVVYEKIGPGWLTYFGFIYLDNKNLDFAINQTLEYAKKLILKEFENFLHGR-------EIARKRYLNIRTLSKCGKWSDVKRALELEEGIE-------------------------ISDSEIYNYLTQLTKHSWII-----KEGEK----YCPSES
3	PPA-I	1yf5L	0.172	0.427	1.078	threading_3	GVDRLWLRACLDHLKACGFDVKRVLPDVLAIPRPEHGLAGDEWLVRKSTTQGAVDAQWLSLLAASDWVQNEGEYLPLQALTPLPELSLAETQEWRYEPSGLVQLLTQEALTSKFNLLTGSFK--------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	1uuqA	0.094	0.895	1.143	threading_4	VGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPA-------VTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFW---------QWSGGMTQYMAWIE---------GEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKAEEKQIYIDWVHAAAAYIKTLDAHHMGSVNDMQVFIDAHATWSWFDKTKPWEKAQNYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELML-----ASLEQGEPSAGYNVFDTP
5	HHPRED-l	2bh1_A	0.172	0.427	5.919	threading_5	GVDRLWLRACLDHLKACGFDVKRVLPDVLAIPRPEHGLAGDEWLVRKSTTQGMAVDAQWLSLLAASDWVQNEGYLPLQALTPLPELLAETQEWRYEPSGLVMQLLTQEALTSKFNLLTGSFK--------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	PROSPECT2	1r4wA	0.050	0.699	1.123	threading_6	VLSPYSWLGFEVLCRYQHLWNIKLK-------------------LRPAL----------LAGIMKDSGNQPPAM-------------------VPHKGQYILKEIPLLKQLFQVPMSVPKDFFGEHVKKGTVNAMRFLTAV-----------------SMEQPEMLEKVSRELWMRIWSRDEDITESQNILSAQAQHLLNKISTELVKSKLRETTGAACKYGAFGLPTTVAHV---DGKTYMLFGSDRMELLAYL--------------LGEKWMGPVP----PTL
7	HHPRED-g	2bh1_A	0.172	0.427	5.503	threading_7	GVDRLWLRACLDHLKACGFDVKRVLPDVLAIPRPEHGLAGDEWLVRKSTTQGMAVDAQWLSLLAASDWVQEGEYLPLQALTPLPELLAETQEWRYEPSGLVMQLLTQEALTSKFNLLTGSFK--------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SAM-T99	1yf5L	0.161	0.413	3.030	threading_8	-VDRLWLRACLDHLKACGFDVKRVLPDVLAIPRPEHGLLGDEWLVRKSTTQG-AVDAQWLSLLAASDWVQNEGE-YLPLQALTPLPELSTQEWRYEPSGLVQL-LTQEALTSKFNLLTGSFK--------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	HHPRED-l	2w7v_A	0.312	0.269	5.605	threading_9	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STDVA-LSWLAALPATLG--QVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAEKFNVEQGQLNRS---V-GSFVLKR-
10	HHPRED-g	2w7v_A	0.308	0.273	5.046	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STDVA-LSWLAALPATLG--QVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAEKFNVEQGQLNRS---V-GSFVLKRQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.735 to 1pszA SCOP code=c.92.2.2	TM-score=0.443 to 2fnaA SCOP code=a.4.5.11	TM-score=0.560 to 1yf5L SCOP code=c.55.1.11	TM-score=0.681 to 1uz4A SCOP code=c.1.8.3	TM-score=0.541 to 1yf5L SCOP code=c.55.1.11