Template-based Modeling Results for YGFS_ECOLI

Submitted Primary Sequence

>Length 162
MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL
CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCHHHHCCCCCCEEECCCEEEEECCCCCCHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL
431100001210100300010013033233322111001102123331000101012032000020011201012320010022301001000100111001012222323320000110332331010021011300101223202311122022224334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL
1	MUSTER	2vpzB	0.274	0.969	4.197	threading_1	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTDGLVLVDPKKCIACGACIAACPYDARYLH-----PAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDV
2	SPARKS	1h0hb	0.255	0.969	5.145	threading_2	-SKGFFVDTTRCTACRGCQVACKQWHGNPATPTEVRMHEQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHDDGCVLFTPKDLEDYESVISACPYDVPRKVAE----SNQMAKCDMCIDRGLRPACVTSCPTGAMNFGDLSEMEAMASARLAEIKAAYS
3	PROSPECT2	2vpwB	0.274	0.969	2.990	threading_3	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHP-----AGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDV
4	PPA-I	2vpzB	0.268	0.969	7.914	threading_4	PRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTDGLVLVDPKKCIACGACIAACPYDARYLHP-----AGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDV
5	HHPRED-l	1kqf_B	0.256	0.988	4.344	threading_5	KAEVKLIDVSTCIGCKACQVACSEWNDIRDEVGVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYK-CTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARG-
6	HHPRED-g	2ivf_B	0.259	0.975	4.765	threading_6	RQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTRWNNVTGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVS----QTSEKCILCYPRGIANACNRQCPGRVRAFGYLDDTTSHVHKLVKKWKALPL
7	SP3	1h0hb	0.255	0.969	4.648	threading_7	-SKGFFVDTTRCTACRGCQVACKQWHGNPATPTEVRMHEQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHATGCVLFTPKDLEDYESVISACPYDVPRKVAE----SNQMAKCDMCIDRGLRPACVTSCPTGAMNFGDLSEMEAMASARLAEIKAAYS
8	SAM-T99	2vpzB	0.273	0.926	5.236	threading_8	-RYAMAIDLSLCVGCAACAVACKMENEVPPGNLWIREREVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHPAG-----YVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKA------
9	MUSTER	1ti4B1	0.219	0.957	3.719	threading_9	MQYYMVIDVAKCQDCNNCFMGCMDEHELNEGHRWMNIERRERYPRNDINYRPTPCMHCENAPCVA-KGNGAVYQRDGIVLIDPEKAKGKKELLDTCPYGVMYWNE----EENVAQKCTMCAHLPKMPRCAHNCGSFVYEFLK--TTPEAMAKKVEEEGLEVI
10	SPARKS	2vpwb	0.274	0.969	4.988	threading_10	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTDGLVLVDPKKCIACGACIAACPYDARYLHP-----AGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.754 to 1ti4B SCOP code=b.3.5.1	TM-score=0.761 to 1ti4B SCOP code=b.3.5.1	TM-score=0.828 to 1h0hB SCOP code=d.58.1.5	TM-score=0.760 to 1ti4B SCOP code=b.3.5.1	TM-score=0.759 to 1ti4B SCOP code=b.3.5.1