Template-based Modeling Results for YGFJ_ECOLI


  Submitted Primary Sequence

>Length 192
MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI
CCCEEEEEECCCCCCCCCCCCEECEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCEECCCEEECHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI
552110000000211223311000202511002000300241022000000230320132113223020011222220100001000011113100000010110212002200313332000000222211000001200220042242220220022032200203123001102013102201321343
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI
1MUSTER2wawA0.2370.9902.690threading_1LSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEKV-ELDGLDIVLVDDAGLGS-SSLKSALTWVDAEGIVLMLGDQPGITASAVASLIAGGGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRHGVRRIRDADVPLDVDTWDDYERLLASVVRL
2SPARKS2wawa0.2420.9903.948threading_2LSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEKV-ELDGLDIVLVDDAGLGS-SSLKSALTWVDPEGIVLMLGDQPGITASAVASLIAGRGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRHGVRRIRDADVPLDVDTWDDYERLLASVVRL
3PROSPECT22wawA0.2320.9903.138threading_3LRRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEKV-ELDGLDIVLVDDAGLGS-SSLKSALTWVDPTAIVLMLGDQPGITASAVASLIAGRGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRHGVRRIRDADVPLDVDTWDDYERLLASVVRL
4PPA-I2wawA0.2200.9953.006threading_4RSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAADEVLEKVELDGLDIVLVDDAGLGS-SSLKSALTWVDPTAIVLMLGDQPGITASAVASLIAGGGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRHGVRRIRDADVPLDVDTWDDYERLLASVVRL
5HHPRED-l2waw_A0.2290.9792.847threading_5RSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEKVELDG-LDIVLVDDAGLG-SSSLKSALTWVTAEGIVLMLGDQPGITASAVASLIAGGRATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRVRRIRV-DADVPLDVDTWDDYERLLASVVR-
6HHPRED-g2waw_A0.2280.9842.966threading_6RSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEK-VELDGLDIVLVDDAGLG-SSSLKSALTWVTAEGIVLMLGDQPGITASAVASLIAGGGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRVRRIRV-DADVPLDVDTWDDYERLLASVVRL
7SP32wawa0.2370.9904.014threading_7LSRVTGVVLAAGYSRRLGTPKQLLPLGDTTLLGATLAMARRCFDQLIVTLGGAADEVLEKV-ELDGLDIVLVDDAGLGS-SSLKSALTWVDAEGIVLMLGDQPGITASAVASLIAGGGATIAVCEYANGIGHPFWVSRGVFGDLAELHGDKGVWRLIESGRHGVRRIRDADVPLDVDTWDDYERLLASVVRL
8SAM-T991h4cA0.1490.9432.954threading_8MTTITGVVLAGGKARAMGVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIYQA-----SGLKVIEDSLADYGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIVNRAIEPLLLEYAGERRVMVFMRLAGGHAVDFSDKDAFVNVNTPEELARWQ------
9MUSTER1h4cA0.1550.9432.588threading_9MTTITGVVLAGGKARAMGGDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIYQA-----SGLKVIEDSLADPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQRKDAPVVWVHDGERDHPALVNRAIEPLLLEYLGERRVMVFMRLAGGHAVDFSHKDAFVNVNTPEELARWQ------
10SPARKS2yesa0.2120.9323.514threading_10-TQITGVVLAAGRSTP----KQLLPYRDTTVLGATLDVARQAFDQLILTLGGAASAVRAAM-ALDGTDVVVVE----DCAASLRVALARVHPRGIVLMLGDQPQVAPATLRRIIDGPATEIMVCRYADGVGHPFWFSRTVFGELARLHGDKGVWKLVHSGRHPVRELAVDGVPLDVDTWDDYRRLLESV---

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.780 to 1i52A
SCOP code=c.68.1.13
TM-score=0.784 to 1i52A
SCOP code=c.68.1.13
TM-score=0.779 to 1i52A
SCOP code=c.68.1.13
TM-score=0.782 to 1i52A
SCOP code=c.68.1.13
TM-score=0.782 to 1vpaA
SCOP code=c.68.1.13