Template-based Modeling Results for YGFH_ECOLI

Submitted Primary Sequence

>Length 492
METQWTRMTANEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARRANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSFVDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIELNHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADNVVTFLLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENPVIPPFMMYSEVLQESVVHLLETGKISGASASSLTISADSLRKIYDNMDYFASRIVLRPQEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSIFMAPSIAKEGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCAHPMYRDYLHRYLENAPGGHIHHDLSHVFDLHRNLIATGSMLG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
METQWTRMTANEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARRANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSFVDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIELNHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADNVVTFLLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENPVIPPFMMYSEVLQESVVHLLETGKISGASASSLTISADSLRKIYDNMDYFASRIVLRPQEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSIFMAPSIAKEGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCAHPMYRDYLHRYLENAPGGHIHHDLSHVFDLHRNLIATGSMLG
CCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCEEEEEEEEEECCCEEEEEECCCCCEEECCCCHHHHHHHHCCEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
METQWTRMTANEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARRANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSFVDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIELNHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADNVVTFLLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENPVIPPFMMYSEVLQESVVHLLETGKISGASASSLTISADSLRKIYDNMDYFASRIVLRPQEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSIFMAPSIAKEGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCAHPMYRDYLHRYLENAPGGHIHHDLSHVFDLHRNLIATGSMLG
552333322122003103320000000001111020001000210222232332110100000112221332122131100100120121012104311000010100200200222211310000010011133010000000100110023031000100321222023112011111113222010011112112210201341000002122222222233322102200210020022112212113310001000010010002201423213202000110231001003113020221110000230022002102312220001022111322002211000000001010200000100211100101100000013011000000000542410100210120211321020000110001031111220031002200112013101310230221212110220020021023223224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	METQWTRMTANEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARRANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSFVDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIELNHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADNVVTFLLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENPVIPPFMMYSEVLQESVVHLLETGKISGASASSLTISADSLRKIYDNMDYFASRIVLRPQEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSIFMAPSIAKEGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCAHPMYRDYLHRYLENAPGGHIHHDLSHVFDLHRNLIATGSMLG
1	MUSTER	2nvvA	0.509	0.974	3.205	threading_1	---ALRFITAEEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIGF-TGASTGARLDGVLAQADAVKFRTPYQSNKDLRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPTTGVGILPTICRLADRIIVELNDKHPKEIG--HDLCEPLDPPARRELPVYTPSDRIGKPYVQVDPAKIVGVVRTSEPNDESDFAPLDPVTQAIGDNVAAFLVSE-KAGRIPKDFLPLQSGVGNVANAVLGALGDNPDI-PAFNYTEVIQDAVIALKKGR-IKFASGCSLSVSRSVIQDIYANLDFFKDKILLRPQEYSNNPEIVRRLGVITINTALEADIFGNINSTHVSGT--RNGIGGSGDFTRNSYVSIFTTPSV-KDGKISSFVP-VAHHDHSEHSVKVIISEWGVADLRGKNPRERAHEIIDKCVHPDYRPLLRQYLELGVKGQTPQNLDCCFAFHQELAKSGDRNV
2	SPARKS	2g39a	0.446	0.961	7.694	threading_2	PSLLDKV-SAAEAADLIQDGTVG--SGFTRAGEAKAVPQALARAKERPLRIS-------LTGASLGNDLDKQLTEAGVL-ARRPFQVDSTLRKAINAGEV-FIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPTTSVGNSASFAIFAKQVIVEINLAHSTNLEGLHDIYIPTYRPTRTPIPLTRVDDRIGSTAIPIPPEKIVAIVINDQPDSPSTVLPPDGETQAIANHLIDFFKREVDAGR-SNSLGPLQAGIGSIANAVCGLIESPF---ENLTYSEVLQDSTFDLIDAGKLRFASGSSITLSPRRNADVFGNLERYKDKLVLRPQEISNHPEVVRRLGIIGINTALEFDIYGNVNSTHVGGTK--NGIGGSGDFARNAHLAIFVTKSIAKGGNISSVVP-VSHVDHTEHDVDILVTEQGLADLRGLAPRERARVIIENCVHPSYQAPLLDYFEAACGGHTPHLLREALAWHLNLEERGHLAG
3	PROSPECT2	2nvvA	0.509	0.974	5.198	threading_3	---ALRFITAEEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKI-GFTGASTGARLDGVLAQADAVKFRTPYQSNKDLRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPTTGVGILPTICRLADRIIVELNDKHPKEIG--HDLCEPLDPPARRELPVYTPSDRIGKPYVQVDPAKIVGVVRTSEPNDESDFAPLDPVTQAIGDNVAAFLVSE-KAGRIPKDFLPLQSGVGNVANAVLGALGDNPDI-PAFNYTEVIQDAVIALKKGR-IKFASGCSLSVSRSVIQDIYANLDFFKDKILLRPQEYSNNPEIVRRLGVITINTALEADIFGNINSTHVSGTR--NGIGGSGDFTRNSYVSIFTTPSV-KDGKISSFVP-VAHHDHSEHSVKVIISEWGVADLRGKNPRERAHEIIDKCVHPDYRPLLRQYLELGVKGQTPQNLDCCFAFHQELAKSGDRNY
4	PPA-I	2nvvA	0.511	0.974	4.919	threading_4	---ALRFITAEEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIGF-TGASTGARLDGVLAQADAVKFRTPYQSNKDLRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPTTGVGILPTICRLADRIIVELNDKHPKEIG--HDLCEPLDPPARRELPVYTPSDRIGKPYVQVDPAKIVGVVRTSEPNDESDFAPLDPVTQAIGDNVAAFLVSE-KAGRIPKDFLPLQSGVGNVANAVLGALGDNPDI-PAFNYTEVIQDAVIALK-KGRIKFASGCSLSVSRSVIQDIYANLDFFKDKILLRPQEYSNNPEIVRRLGVITINTALEADIFGNINSTHVSGTR--NGIGGSGDFTRNSYVSIFTTPS-VKDGKISSFVP-VAHHDHSEHSVKVIISEWGVADLRGKNPRERAHEIIDKCVHPDYRPLLRQYLELGVKGQTPQNLDCCFAFHQELAKSGDRNV
5	HHPRED-l	2nvv_A	0.517	0.967	5.903	threading_5	-ALRF--ITAEEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIG-FTGASTGARLDGVLAQADAVKFRTPYQSNKDLRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPTTGVGILPTICRLADRIIVELNDKHPKEI---HDLCEPLDPPARRELPVYTPSDRIGKPYVQVDPAKIVGVVRTSEPNDESDFAPLDPVTQAIGDNVAAFLVSE-KAGRIPKDFLPLQSGVGNVANAVLGALGDNPDIPAFN-YTEVIQDAVIAL-KKGRIKFASGCSLSVSRSVIQDIYANLDFFKDKILLRPQEYSNNPEIVRRLGVITINTALEADIFGNINSTHVSGTR--NGIGGSGDFTRNSYVSIFTTPSV-KDGKISSFVP-VAHHDHSEHSVKVIISEWGVADLRGKNPRERAHEIIDKCVHPDYRPLLRQYLELGVKGQTPQNLDCCFAFHQELAKSGD-R-
6	HHPRED-g	2nvv_A	0.516	0.970	0.654	threading_6	---ALRFITAEEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIG-FTGASTGARLDGVLAQADAVKFRTPYQSNKDLRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPTTGVGILPTICRLADRIIVELNDKHPKEI---HDLCEPLDPPARRELPVYTPSDRIGKPYVQVDPAKIVGVVRTSEPNDESDFAPLDPVTQAIGDNVAAFLVSE-KAGRIPKDFLPLQSGVGNVANAVLGALGDNPDIPAFN-YTEVIQDAVIAL-KKGRIKFASGCSLSVSRSVIQDIYANLDFFKDKILLRPQEYSNNPEIVRRLGVITINTALEADIFGNINSTHVSGTR--NGIGGSGDFTRNSYVSIFTTPSV-KDGKISSFVP-VAHHDHSEHSVKVIISEWGVADLRGKNPRERAHEIIDKCVHPDYRPLLRQYLELGVKGQTPQNLDCCFAFHQELAKSGD-RN
7	SP3	2g39a	0.450	0.961	7.685	threading_7	PSLLDKV-SAAEAADLIQDGTVG--SGFTRAGEAKAVPQALARA------KERPLRISL-TGASLGNDLDKQLTEAGVL-ARRPFQVDSTLRKAINAGEV-FIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPTTSVGNSASFAIFAKQVIVEINLAHSTNLEGLHDIYIPTYRPTRTPIPLTRVDDRIGSTAIPIPPEKIVAIVINDQPDSPSTVLPPDGETQAIANHLIDFFKREVDAGR-SNSLGPLQAGIGSIANAVCGLIESPF---ENLTYSEVLQDSTFDLIDAGKLRFASGSSITLSPRRNADVFGNLERYKDKLVLRPQEISNHPEVVRRLGIIGINTALEFDIYGNVNSTHVGGTK--NGIGGSGDFARNAHLAIFVTKSIAKGGNISSVVP-VSHVDHTEHDVDILVTEQGLADLRGLAPRERARVIIENCVHPSYQAPLLDYFEAACGGHTPHLLREALAWHLNLEERGHLAG
8	SAM-T99	2nvvA	0.507	0.970	4.508	threading_8	-----RFITAEEAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIGFT-GASTGARLDGVLAQADAVKFRTPYQSNKDLRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPTTGVGILPTICRLADRIIVELNDKHPKEIG--HDLCEPLDPPARRELPVYTPSDRIGKPYVQVDPAKIVGVVRTSEPNDESDFAPLDPVTQAIGDNVAAFLVSE-KAGRIPKDFLPLQSGVGNVANAVLGALGDNPD-IPAFNYTEVIQDAVIAL-KKGRIKFASGCSLSVSRSVIQDIYANLDFFKDKILLRPQEYSNNPEIVRRLGVITINTALEADIFGNINSTHVSGTR--NGIGGSGDFTRNSYVSIFTTPSVK-DGKISSFVPVAHH-DHSEHSVKVIISEWGVADLRGKNPRERAHEIIDKCVHPDYRPLLRQYLELGVKGQTPQNLDCCFAFHQELAKSGDRNV
9	MUSTER	2g39A	0.446	0.961	3.142	threading_9	PSLLDKV-SAAEAADLIQDGTVGS--GFTRAGEAKAVPQALARA------KERPLRISL-TGASLGNDLDKQLTEAGVLARR-PFQVDSTLRKAINAGEV-FIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPTTSVGNSASFAIFAKQVIVEINLAHSTNLEGLHDIYIPTYRPTRTPIPLTRVDDRIGSTAIPIPPEKIVAIVINDQPDSPSTVLPPDGETQAIANHLIDFFKREVDAGR-SNSLGPLQAGIGSIANAVCGLIESPF---ENLTYSEVLQDSTFDLIDAGKLRFASGSSITLSPRRNADVFGNLERYKDKLVLRPQEISNHPEVVRRLGIIGINTALEFDIYGNVNSTHVGG--TKNGIGGSGDFARNAHLAIFVTKSIAKGGNISSVVP-VSHVDHTEHDVDILVTEQGLADLRGLAPRERARVIIENCVHPSYQAPLLDYFEAACAGHTPHLLREALAWHLNLEERGHLAG
10	SPARKS	3qlia	0.261	0.848	6.565	threading_10	MDYDEKLTTPEEAVSSIASGSHLSMGMF--AAEPPALLKALADRATR--GDIGDLRVYYFETAKIAGDTILRYELNN-RIKPYSMFVTAVERALIRRGVVNYVPSNFHQAPRLLAEEI--GIDTFMHTVSPMDCHGYFSLGVGNDYSSRIARSARRFIVEVNRYMP----------------------------RVQGEAAAIHISEVDAIVENHVPLIEMPVRSAIPEYTSISHIIADLV----------PDGACLQMGVGALPNLVCGVLKD---RNDLGIHTEVLNPGLVDLIRRGVVTNQRKTSVFTFAMGQQEMYEYLNDHP-AIFSRPVDYVNDPHIIQNDNVVSINATLQIDLTGACNSEHM-LGHQYSASGGQLDFVRGAYASIIATPSTAAKGTVSRIIPRIDPVTTPRIDTHYIVTEFGAVNLKGLSSTERALRII-ELAHPDFRDELTQAAKKM------HLI------------------

Predicted Tertiary Structure


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TM-score=0.937 to 2g39A SCOP code=c.124.1.2	TM-score=0.938 to 2g39A SCOP code=c.124.1.2	TM-score=0.970 to 2g39A SCOP code=c.124.1.2	TM-score=0.938 to 2g39A SCOP code=c.124.1.2	TM-score=0.939 to 2g39A SCOP code=c.124.1.2