Template-based Modeling Results for YGEY_ECOLI

Submitted Primary Sequence

>Length 403
MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCEEEECCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE
5543222310121033012200300210030303113133002101300350211102023210000100423200000000000100223313111230111220000100000100000000002102312243200000001232331312001000231123010000020131100100201020101010010011113202000110020001022003312223111301000000011121300001100010001002331131012102200112322220112233322120010212121121313431200200020022113321211101100200000032102000000033320121211020210120020001001210334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE
1	MUSTER	3ic1A	0.208	0.893	2.892	threading_1	----------------MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETRDEKITYCMVGEPSGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWDKG-NEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLT----------------KPGKLLDSITSAIEETIGITPKAETG-GGTSDGRFIALMGAEVVEFGPLN-STIHKVNECVSVEDLGKCGEIYHKMLVNLLD--
2	SPARKS	3pfoa	0.194	0.960	5.625	threading_2	TKSDAITQSLRAAVDRNFNDQVAFLQ-RVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSAGSQVVATADGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWI-GRGAQDKGGVSAIFALDAIRT--AGYAPDARVHVQTVTEEES-TGNGALSTL--RGYRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILHLIRAFEEYTKELNAQAVGQVKNPIKFNVGIIKGGDWA-SSTAAWCELDCRLGLLTGDTPQEARGIEKCLADAQATDSFLSENPA-------ELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIPALCYGPYG-QGPHAFDERIDLESLRKTTLSIALFVAEWCGLR
3	PROSPECT2	3ic1A	0.208	0.893	4.593	threading_3	M----------------KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWFNDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVEARDEKITYCMVGEPSGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWD-KGNEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLT----------------KPGKLLDSITSAIEETIGITPKAETGGGTSDG-RFIALMGAEVVEFGPLN-STIHKVNECVSVEDLGKCGEIYHKMLVNLL--D
4	PPA-I	3ic1A	0.206	0.893	4.550	threading_4	----------------MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMNDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLDEKITYCMVGEPSGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWDKG-NEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLT----------------KPGKLLDSITSAIEETIGITPKAETGGGTS-DGRFIALMGAEVVEFGPLN-STIHKVNECVSVEDLGKCGEIYHKMLVNLLD--
5	HHPRED-l	3pfo_A	0.209	0.948	3.019	threading_5	-TKSDAIQSLRAAVDRNFNDQVAFLQR-VQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSGS-QVVATADSDGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGW-IGRGAQD-KGGVSA-IFALDAIRTAGYAPDARVHVQTVTEEESTGNGALSTL-RG--YRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILSA-HLIRAFEEYTKELNADPFGQPIKFNVGIIKGG-DWASSTAAWCELDCRLGLLTGDTPQEA-RGIEKCLADAQATDSFL---SEN--PAELVWSGF-QADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTR-YYSVDGIPALCYGPYGQG-PHAFDERIDLESLRKTTLSIALFVAEWCGL-
6	HHPRED-g	1vgy_A	0.194	0.893	2.859	threading_6	-----------------TEQSLELAKELISRPSVTPDDRDCQKL-AERLHKIGFAAEEFGNTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAAD-KTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVKARDELIDYCIVGEPTAD-IKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEG-NEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLT----------------QAGKLTDVARAAIAETCGIEAELSTT-GGTSDGRFIKA-AQELIELGP-SNATIHQINENVRLNDIPKLSAVYEGILVRLL---
7	SP3	3pfoa	0.199	0.958	5.875	threading_7	KSDAI-TQSLRAAVDRNFNDQVAFLQ-RVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSAGSQVVATADGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWI-GRGAQDKGGVSAIFALDAIRTAGYAP--DARVHVQTVTEEESTG-NGALSTL--RGYRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILHLIRAFEEYTKELNAQAVGQVKNPIKFNVGIIKGGD-WASSTAAWCELDCRLGLLTGDTPQEARGIEKCLADAQATDSFLS-ENPAELVWSGF------QADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIPALCYGPYG-QGPHAFDERIDLESLRKTTLSIALFVAEWCGLR
8	SAM-T99	3ic1A	0.206	0.891	4.466	threading_8	----------------MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMNDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVEMADEKITYCMVGEPSSDVVKNGRRGSITGNLYIQGIQ----YPHLAENPIHKAALFLQELTTYQWDKG-NEFFPPTSLQIANIHAG--TGSVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLK---------------YRIEWNLSGKPFLTKP-GKLLDSITSAIEETIGITPKAETGGGTSDGRFIA-LMGAEVVEFGPLN-STIHKVNECVSVEDLGKCGEIYHKMLVNLL---
9	MUSTER	1vgyA	0.196	0.898	2.806	threading_9	----------------TETQSLELAKELISRPSVTPDDRDCQK-LAERLHKIGFAAEEFGNTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAAD-KTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVRDELIDYCIVGEPTAVDIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEG-NEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLT----------------QAGKLTDVARAAIAETCGIEAEL-STTGGTSDGRFIKA-AQELIELGPSN-ATIHQINENVRLNDIPKLSAVYEGILVRLL---
10	SPARKS	3tx8a	0.209	0.866	5.133	threading_10	---------------DLLGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFFNNNVLARTNRGLASRVLAGHIDTVPIAD-------NLPSRVEDG-IYGCGTVDKSGLAVYLHTFATLA--TSTELKHDLTLIAYECEEVADHLNGLGHIRDEWLAADLALLGEPTGGWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAHK-LSPIISKVAAYKAAEVIDGLTYREGLNIVFCESGV-ANNVIPD-LAWNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDGAGGA---------LPGLGQQ--------VTSGLIDAVGREKIRAK-FGWTDVSRFSA--GIPALNFGAGDPSFAHKRDEQCPVEQITDVAAILKQYLSE-----

Predicted Tertiary Structure


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TM-score=0.796 to 1vgyA SCOP code=c.56.5.4	TM-score=0.795 to 1vgyA SCOP code=c.56.5.4	TM-score=0.730 to 1lfwA SCOP code=c.56.5.4	TM-score=0.788 to 1vgyA SCOP code=c.56.5.4	TM-score=0.790 to 1cg2A SCOP code=c.56.5.4