Template-based Modeling Results for DPAL_ECOLI

Submitted Primary Sequence

>Length 398
MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVAP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVAP
CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCEECCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVAP
44211111111313223232121022210210230134022133021120330022021220001321231212002000000000200132132323221122122222331100000101002000000420302000000310131102002411010000211131003101200442100001101131123111100100000011002103412231100000001000000000001311233201000010330200020024221020223110000001012123100300230022000011210020021002211332200002000000000011222331211133122343110000003121113001100220332224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVAP
1	MUSTER	2zr8A	0.204	0.799	2.385	threading_1	--------------------LVLPT---YDDVASASERIKFANKTPVLTSSTVNKEFVAEVFFKCENFQK--MGAFKFRGALNALSQL------------------NEAQRKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPP-----YD--HPHVLAGQGTAAKELFEEVG----PLDALFVCLGGGGLLSGSALAARHFA--PNCEVYGVEPEAGNDGQQSFRKGSIVHID-TPKTIADGAQTQHLGNYTFSIIKEKVDDILTVSDEELIDCLKFYAAR----MKIVVEPTGCLSFAAARAMKEK------------LKNKRIGIIISGGNVDIERYAHFLSQ-------
2	SPARKS	3hmka	0.188	0.804	5.731	threading_2	------------------AQYDI----SFADVEKAHLNIDSVHLTPVLTSSILNQIAG-RNLFFKCELFQ-KTGSFKIRGALNAIRGLIPD---------------TLEGKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYSEPSDESRENVAQRIIQETEGILVHPNQ-------EPAVIAGQGTIALEVLNQVPL----VDALVVPVGGGGMVAGIAITIKTLK--PSVKVYAAEPSNADDCYQSKLKGELTPNLHPPETIADGVK-SSIGLNTWPIIRDLVDDVFTVTEDEIKYATQLVWERM----KLLIEPTAGVGLAAVLS---------QHFQTVSPEVKNICIVLSGGNVDLTSLS------------
3	PROSPECT2	2gn0A	0.172	0.819	3.472	threading_3	MASHITY-------------DLPVAIEDILEAKKRLA--GKIYKTGMPRSNYFSERCKGEIFLKFENMQR--TGSFI-RGAFNKLSSLTEAEK------------------RKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVETEGRIFIPPYDD-------PKVIAGQGTIGLEIMEDLY----DVDNVIVPIGGGGLIAGIAIAIKSIN--PTIKVIGVQAENVHGMAASYYTGEITTHRTT-GTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRN----KVITEGAGALACAALLSGKLDSHI----------QNRKTVSIISGGNIDLSRVSQIT--------G
4	PPA-I	2zr8A	0.201	0.802	3.760	threading_4	--------------------LVLPTYDDVASASERIK--KFANKTPVLTSSTVNKEFVA-EVFFKCENFQK-MGAFKFRGALNALSQLNEAQRKAG------------------VLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPPYD-------HPHVLAGQGTAAKELFEEVG----PLDALFVCLGGGGLLSGSALAARHFA--PNCEVYGVEPEAGNDGQQSFRKGSIVHI-DTPKTIADGAQTQHLGNYTFSIIKEKVDDILTVSDEELIDCLKFYAARM----KIVVEPTGCLSFAAARAMKEK------------LKNKRIGIIISGGNVDIERYAHFLSQ-------
5	HHPRED-l	1tdj_A	0.218	0.832	2.995	threading_5	-----------------QPLSGAPEAEYLRAVLRA-PVYEAAQVTPLQKMEKLSSRLDN-VILVKREDRQ-PVHSFKLRGAYAMMAGLTEE------------------QKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPF-------DHPMVIAGQGTLALELLQQDA----HLDRVFVPVGGGGLAAGVAVLIKQL--MPQIKVIAVEAEDSACLKAALDAGHPVDLPR-VGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFEDVR----AVAEPSGALALAGMKKYIALHN----------IRGERLAHILSGANVNFHGLRYVSERCEEALL-
6	HHPRED-g	1tdj_A	0.216	0.837	3.489	threading_6	-------------QPLSGAP---EGAEYLRAVLRA-PVYEAAQVTPLQKMEKLSSRLD-NVILVKREDRQ-PVHSFKLRGAYAMMAGLTEEQ------------------KAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDH-------PMVIAGQGTLALELLQQDA----HLDRVFVPVGGGGLAAGVAVLIKQLM--PQIKVIAVEAEDSACLKAALDAGHPVDL-PRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMK----DLFEDVRAVAEPSGALALAGMKKYIALHNIR----------GERLAHILSGANVNFHGLRYVSERCELGEQR
7	SP3	3hmka	0.184	0.804	5.782	threading_7	------------------AQYDIS----FADVEKAHLNIDSVHLTPVLTSSILNQIAGR-NLFFKCELFQ-KTGSFKIRGALNAIRGLIPDTLEG---------------KPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYSEPSDESRENVAQRIIQETEGILVHPNQ-------EPAVIAGQGTIALEVLNQVP----LVDALVVPVGGGGMVAGIAITIKTLK--PSVKVYAAEPSNADDCYQSKLKGELTPNLHPPETIADGVKSS-IGLNTWPIIRDLVDDVFTVTEDEIKYATQLVWERM----KLLIEPTAGVGLAAVLS---------QHFQTVSPEVKNICIVLSGGNVDLTSLS------------
8	SAM-T99	1tdjA	0.227	0.829	4.217	threading_8	--------------------QPLSGAPEGAEYLRAVLRAPVYEATPLQKMEKLSSRLD-NVILVKREDRQ-PVHSFKLRGAYAMMAGLTEEQ------------------KAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHP-------MVIAGQGTLALELLQQDAHL----DRVFVPVGGGGLAAGVAVLIKQLMPQ--IKVIAVEAEDSACLKAALDAGHPVDLP-RVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFE----DVRAVAEPSGALALAGMKKYIALHN----------IRGERLAHILSGANVNFHGLRYVSERCELGEQR
9	MUSTER	2gn0C	0.178	0.817	2.348	threading_9	MSHITYDLP--------------VAIEDILEAKKRLA--GKIYKTGMPRSNYFSERCKGEIFLKFENMQR--TGSF-IRGAFNKLSSL------------------TEAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVETEGRIFIPP-----YD--DPKVIAGQGTIGLEIMEDLY----DVDNVIVPIGGGGLIAGIAIAIKSIN--PTIKVIGVQAENVHGMAASYYTGEITTHR-TTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR----NKVITEGAGALACAALLSGKLDSHI----------QNRKTVSIISGGNIDLSRVSQITG--------
10	SPARKS	3ss7x	0.170	0.960	4.959	threading_10	MNSLIAQVKDLVGTTSLAEGLPYVTEQDVQDAHARLSRFGGIIESELVAIPAMQKRLESGQLLLKKDSHLPISGSIKARGGIYEVLAHAALEAGLLTLDDDYSKLLSPEFKQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFID------DENSRTLFLGYSVAGQRLKAQFAQQGRIVDFVYLPCGVGGGPGGVAFGLKLAFG-DHVHCFFAEPTHSPCMLLGVHTGLHDQISQDIGTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEE----GIRLEPSALAGMAGPQRVCASVSYQQMHGSAEQLRNTTHLVWATGGGMVEEEMNQYLAKGR-----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.836 to 1ve5A SCOP code=c.79.1.1	TM-score=0.829 to 1ve5A SCOP code=c.79.1.1	TM-score=0.828 to 1ve5A SCOP code=c.79.1.1	TM-score=0.845 to 1ve5A SCOP code=c.79.1.1	TM-score=0.839 to 1ve5A SCOP code=c.79.1.1