Template-based Modeling Results for YGEW_ECOLI

Submitted Primary Sequence

>Length 396
MMKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEHHHHCCCCCEEECHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK
543202301310221022023310021221123102200200110121323322231031100000022102210000000023011000001323121132120320020011000000011122222121113200200210131031232200000101230001000100102221121431322200001011122131000000000000201010000003212013300210221043210102002003100330100002010112113111212323333223222220111122133120122002213322000000000112121133110121014232000022023111000000001221211100220233133325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK
1	MUSTER	3q98A	0.862	0.914	2.903	threading_1	--KTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSG-----LGISVFRDRFSYASALNLLGLAQQDL-------DHGETVRETANI-SFCADAIGIRDDYLG-----AYREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQS-ADLAWLREHFGSLENLKGKKIATWAY-------SPSYGKPLSVPQGIIGLDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTS-EEAFKDADIVYPKSWAPYKV-EERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEEL---TRDGEALYHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAILSRKYA-KPGALLEQLLKEAQERVK
2	SPARKS	3q98a	0.843	0.914	5.756	threading_2	--KTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSG-----LGISVFRDRFSYASALNLLGLAQQD-------LDHGETVRETANI-SFCADAIGIRDDYLG-----AYREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQS-ADLAWLREHFGSLENLKGKKIAT-------WAYSPSYGKPLSVPQGIIGLDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTS-EEAFKDADIVYPKSWAPYKVEERTELLR-ANDHEGLKALEKQCLAQNAQHKDWHCTEEEL---TRDGEALYHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAILSRKYA-KPGALLEQLLKEAQERVK
3	PROSPECT2	3updA	0.236	0.846	4.591	threading_3	HHHHHH--YFQSNAMAFNLRNRNFLKLLDFSTKEIQFLIDLSADLKKAKYAGTEQKKLLGKNIALIFEKASTRTRCAFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRMYDGIQYRGFGQ------------AIVEELGAFAGVP----VWNGLTDEFHPTQILADFLTMLEHSQG-KALADIQFAYLGDAR------NNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWD------------------ERVALMKPYQVNMNVLKQTGNPNVKFMHCLPAFHNDEGMKGLEVTEEVFESEHSIVFDEAENRMHTIKAVMVATLG------------------S
4	PPA-I	1duvG	0.240	0.811	3.887	threading_4	----------------SGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYG------------QEIVETLAEYASVP----VWNGLTNEFHPTQLLADLLTMQEHLPG-KAFNEMTLVYAGDAR------NNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEA------------------KEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK------------------
5	HHPRED-l	3q98_A	1.000	0.919	3.711	threading_5	--KTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRD-----RFSYASALNLLGLAQQDLD-------HGETVRETAN-ISFCADAIGIRDD-YLGA-----REVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQS-ADLAWLREHFGSLENLKGKKIA-TWAYSPSYGKPLSVPQGIIGL-TRFG-DVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTS-EEAFKDADIVYPKSWAPYKV-EERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEE--ELTRDGEALY-HCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAA-ILSRKYAKPGALLEQLLKEAQERV-
6	HHPRED-g	3q98_A	1.000	0.922	3.279	threading_6	--KTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRD-----RFSYASALNLLGLAQQDLD-------HGETVRETAN-ISFCADAIGIRDD-YLGA-----REVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQS-ADLAWLREHFGSLENLKGKKIA-TWAYSPSYGKPLSVPQGIIGL-TRFG-DVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTS-EEAFKDADIVYPKSWAPYKV-EERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEE--ELTRDGEALY-HCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAA-ILSRKYAKPGALLEQLLKEAQERVK
7	SP3	3q98a	0.840	0.914	6.113	threading_7	--KTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSG-----LGISVFRDRFSYASALNLLGLAQQD-------LDHGETVRETANI-SFCADAIGIRDDYLG-----AYREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQS-ADLAWLREHFGSLENLKGKKIAT-------WAYSPSYGKPLSVPQGIIGLDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSE-EAFKDADIVYPKSWAPYKVEERTELLR-ANDHEGLKALEKQCLAQNAQHKDWHCTEEEL---TRDGEALYHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAILSRKYA-KPGALLEQLLKEAQERVK
8	SAM-T99	1a1sA	0.260	0.785	3.700	threading_8	---------------VVSLAGRDLLCLQDYTAEEIWTILETAKMFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDH----------------KDVEDLAKYATVPVINGLSDFSHPCQALADYMTIWEKKGTIKGVK----------VVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEA-------------------EERRKIFRPFQVNKDLVKHAK-PDYMFMHCLPAHR------GEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVMGG------------------
9	MUSTER	1a1sA	0.275	0.790	2.771	threading_9	VV---------------SLAGRDLLCLQDYTAEEIWTILETAKMFKIWQKIGKPHRLLEGKTLAMIFQKPSTRTRVSFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYD------------HKDVEDLAKYATVP----VINGLSDFSHPCQALADYMTIWEKKGT---IKGVKVVYVG-------DGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAE-------------------AEERRKIFRPFQVNKDLVKHA-KPDYMFMHCLPAHR------GEEVTDDVIDSPNSVVWDQAENRLHAQKAVLALVMGG----------------IK
10	SPARKS	3sdsa	0.266	0.770	5.397	threading_10	-------------------TPRHLLSIADLTPTEFATLVRNASSYKKTIKSDSMPGALSGKTVAMMFSKRSTRTRVSTEGAVVKMGGHPMFLGKD--DIGVNESLYDTSVVISSMVSCIVARVGP------------HSDIANLAKHSSVP----VINALCDTFHPLQAIADFLTIHESFASSLGLEGLKIAWV-------GDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREQSPGNLTQTTVPEVAVKDADVIVTDTWK---------------------------IKRLEAFKDFKVTSELAKRGGKENWKFMHCLPRHPE-------EVSDEVFYSERSLVFPEAENRLWAAISALEAFVVNK-GKIA------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.767 to 1a1sA TM-score=0.953 to native SCOP code=c.78.1.1	TM-score=0.773 to 1a1sA TM-score=0.954 to native SCOP code=c.78.1.1	TM-score=0.774 to 1a1sA TM-score=0.955 to native SCOP code=c.78.1.1	TM-score=0.863 to 1a1sA TM-score=0.762 to native SCOP code=c.78.1.1	TM-score=0.881 to 1duvG TM-score=0.755 to native SCOP code=c.78.1.1

Experimental Structure

Download 3q98A

SCOP code=c.78.1.1