Template-based Modeling Results for YGEQ_ECOLI

Submitted Primary Sequence

>Length 278
MVIYAFNKRLMEYFMKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRLLIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGIPVQMNAVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLKSVALLIAYLDKANFYVMEDS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVIYAFNKRLMEYFMKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRLLIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGIPVQMNAVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLKSVALLIAYLDKANFYVMEDS
CEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVIYAFNKRLMEYFMKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRLLIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGIPVQMNAVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLKSVALLIAYLDKANFYVMEDS
31001102200210130220000000000100203122110113101100212122223210111233121010001012012104221223102001200321330201332200000001123232223120100000000000000012222221012001100200211310320220121233232122212000010223120111023323221022100100000000001002222132332331310200110000011021122344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVIYAFNKRLMEYFMKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRLLIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGIPVQMNAVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLKSVALLIAYLDKANFYVMEDS
1	PROSPECT2	3a0oA3	0.116	0.964	1.208	threading_1	CGWAEFYEKSVEPWLERPDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVAAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLER----------TREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATHYWMTGMAYLIEIGYDLYQRPFFQNTGRKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVE
2	HHPRED-l	1gai_A	0.193	0.597	1.370	threading_2	------------------------------------------------------------------------------ATLDSWLSNEATV----ARTAILNNIGAAWVSGADSGIVVASPSTDNP------DYFYTWTRDSGLVIKTLVDFRNG---DTDLLSTIEHYISSQA---IIQGV-SN---PSGDLSSGGLGEPKFNVDE--------TAYTGSWGRPQRDGPALRATAMGQWLDNGYTSAA---TEIVWPLVRNDLSYV--AQYWNQTG-
3	HHPRED-g	2vn4_A	0.149	0.579	2.298	threading_3	-------------------------------------------------------------------------------SVDDFISTETPIA----LNNLLCNVGPDRAFGTSAGAVIASPSTI------DPDYYYMWTRDSALVFKNLIDRF------TETYD--------AGLQRRIEQYITA-------QVTLQGPSGSLADGGLPKFELTLKPFTGNWGRPQRDGPALALIGYSKLINNNY---QS--TVSNWPIVRNDLNYVAQY--WNQTGF
4	PROSPECT2	1hzfa	0.072	0.953	1.194	threading_4	------SPGGVASLLRIYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKQQFRKADGSYAAWLSRDSSTWLTAFVLKVLSLAQEQVSPEKLQETSNWLLSQQQADGSFQDPCP-----VLDRSQGGLVGNDETVALTAFVTIALHHGLAVFQDEGAEPLKQRVEASIS--KASSFLGEKASAGLLGAHAAAITAYALTLTKAPADLRGVAHNNLAAQEWGQAPALWIETTAYALLHLLLHEGKAEADQASAWLTRQQDTVIALDALSAYWIASHT
5	HHPRED-l	2vn4_A	0.180	0.579	1.230	threading_5	-------------------------------------------------------------------------------SVDDFIS-----TETPALNNLLCNVGGCRAFGTSAGAVIASPSTID------PDYYYMWTRDSALVFKNLIDRTYDA----GLQRRIEQYIT-------AQVTLQGLSNPSGSL---A------DGSGLGEPKFELTLKPGNWGRPQRDGPALALIGYSKWLNNNYQS----TVSNIWPIVRNDLNYV--AQYWNQTG-
6	HHPRED-g	2fba_A	0.163	0.662	2.290	threading_6	-----------------------------------------------------------AYPSFEA--YSNYK--VDRTDLETFL-----DKQKEVLYYLLQNIAEGQFNNGVPGTVIASPSTS------NPDYYYQWTRDSAITFLTVLSE-LEDNNFNTTLAKAV---EYYINTSYNLQRTSN-------------PSGSFDDE-NHKGLGEPKFNTGAWGRPQNDGPALRAYAISRYLNDVNEGKINFSSTEYKNIIKPDLEYVIGY--WDSTGF
7	PROSPECT2	1ct9a1	0.065	0.881	1.188	threading_7	TDKNELRQALEDSVKSDSSIISAITKKYALHSFAVGLPGSPDLKAAQEVANHLG--------------TVHHEIHFTVQEGLDAIRETYDVTTIRASTPMYL--------------MSRKIKAMGIKMVLSGEG-----SDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVDKKFLDVAMRINDKMCKMEKHILRECFEAYLPASVYSWIDTLKEVAAQQVSDQQLETAFPYNTPTSKEAYLYREIFEELFPLPSAAECVPG
8	HHPRED-l	1lf6_A	0.178	0.788	1.207	threading_8	YVIKANNNELM--AKRDNVYTALSSNIGWKGYSIGYYKV---NDIM-TDLDENKQMTRIEGAEIDLTKNSEFEIVLSSAKTALELGEDYKANSLYYMMILKASED-----KTNKGAYIASLSIPWGDGQRTGGYHLVWSRDLYHVANAFIA-AGDVDSANRSLDYLAKV------V-----------KDNGM--IPQNTWI--S------------GKP-YWTGIQLDEQADPIILSYRLKRYDLYD----S------LVKPLADFII--KIGPKTG-
9	HHPRED-g	1gai_A	0.185	0.604	2.289	threading_9	------------------------------------------------------------------------------ATLDSWLSNEATVA----RTAILNNIGAAWVSGADSGIVVASPSTDN------PDYFYTWTRDSGLVIKTLVDLF-RN-GDTDLLSTIEHYISS----QAIIQGVSNPSG-DLSS--GGLGEPKFN--------VDETAYTGSWGRPQRDGPALRATAMIGLLDNGY---TSAATEIVWPLVRNDLSYVAQY--WNQTGY
10	PROSPECT2	1ezfa	0.067	0.917	1.149	threading_10	NS-LKTCYKYLNQTSRSMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQCRRMGIGMAEFLDKHVTSEQEWDKYCHYVAG--------------LVGIGLSRLFSASEFEDPLVGTERANSMGLFLQKTNIIRDYLEDQQGGREF--------WPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNHIPDVITYLSRLRNGAVKIDATNMPAVKAIIYQYMEEIYHRIPTQN

Predicted Tertiary Structure


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TM-score=0.599 to 1fp3A SCOP code=a.102.1.3	TM-score=0.519 to 2g0dA SCOP code=a.102.6.1	TM-score=0.479 to 1dl2A SCOP code=a.102.2.1	TM-score=0.893 to 1hzfA SCOP code=a.102.4.4	TM-score=0.458 to 1dceB SCOP code=a.102.4.3