Template-based Modeling Results for YGEH_ECOLI

Submitted Primary Sequence

>Length 458
MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR
CCCCCCCEEEECCCEEECCCCEEEECCEEEEECHHHHHHHHHHHHCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCHHHHHHHCCCCEEEEEEEEECCCEEEEEEEEEECCCCCEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR
55433321110130000133010122412020123100000000312111001310022003211223210120011012213523232001002410110001113122233221311121121212222211110022002000132131010000000211433221210023031100010100233310101010020432100001202032122002100220020023113222223333123322101000001311131133002201200220131041102101000000000000011122323200220120021004012200300000000000112031012001101311130020010000000113203201200130130113333000010000010112132002101331233132200111011221232025
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR
1	MUSTER	3ly7A	0.102	0.683	1.226	threading_1	------------------------------------------------------------------------------------------------------------SRILLNPRDIDINMVNKSNSWSSPYQLSYAIGVGDLVATSLNSTFMVHDKINYNIDEPSS----SGKTLSIAFVNQRQ--YRAQQCFMSIKLVDNADGSTMLDKRYVITNQLAIQNDLLESLSKALNQPWPQRMQETLQKLPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQS----PEFTYARAEKALVDIVRHSQHPLD-EKQLAALNTEIDNIVTLLNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRP-GANTLYWIENGIFQT--SVPYVVPYLDKFLAS----------------------
2	SPARKS	1w3ba	0.101	0.821	1.339	threading_2	-----------GPMEL---AHREYQAGDF----EAAERHCMQLWREPD---NTGVLLLLS--SIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQE-------------AIEHYRHLRLKPDFIDGYINLAAALVAA----------------GDMEGAVQAYVSA---------LQYNPDLYCVRSDLGNLALGRLCYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEA---RIFDRAVAAYLRAL---SLSPNHAVVHGNLACVYYEQ---------GLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAA-HSNLASVLQQQGKLQEALMHYKEAIRISPTF-----ADAYSNMGNTLKE
3	SAM-T99	1gxqA	0.274	0.207	2.632	threading_3	-------EVIEMQGLSLDPTHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	MUSTER	1w3bA	0.138	0.808	1.011	threading_4	MEL--HREYQAGDF-----EAAERHCMQLWRQEPDNTGVLLLLSS------IHFQC-------------RLDRSAHFSTLAIK---NPLLAEAYSNLGNVYK-----------ERGQLQEAIEHYRHLRLKPDFIDGYINLAAALVAADMEGAVQAYVSALQYNPDLYCLGNLLKALG-RL---------EEAKACYLKAIETQPNFAAWSNL--------CVFNAQGEIWLAIHHFEKAVTLDPN-------FLDAYINLGNVLKEA---RIFDRAVAAYLRALSL----PNHAVVHGNLACVYYEQ----------LIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF-----ADAYSNMGNTLKE
5	PROSPECT2	3ly7A	0.099	0.683	2.544	threading_5	SRILLNPRDID-------------------------------------------------------------------------------INMV----------------------------NKSCNSWSSPYQLSYAIGVGDLVATNTFSTFMVHDKINYNIDEPSS----SGKTLSIAFVNQRQYR--AQQCFMSIKLVDNADGSTMLDKRYVITN--GNQLAIQNDLLESLSKALNQPWPQRQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGE---IVQSSPEFTYARAEKALVDIVRHSQHPLD-EKQLAALNTEIDNIVPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENGIFQTSVPYVVPYLDKFLA-------------------------S
6	PPA-I	3ly7A	0.105	0.683	1.635	threading_6	-----------------------------------------------------------------------------------------------------------SRILLNPRDIDINMVNKSCNSWSSPYQLSYAIGVGDLVATSTFSTFMVHDKINYNIDEPSSSGKTLS------IAFVNQRQYRAQQCFMSIKLVDNADGSTMLDKRYVITN--GNQLAIQNDLLESLSKALQRMQETLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSS---PEFTYARAEKALVDIVRHSQHPLD-EKQLAALNTEIDNIVTLLNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENGIFQTSVPYVVPYLDKFLAS-------------------------
7	HHPRED-l	3ly7_A	0.101	0.670	3.039	threading_7	---------------------------------------------------------------------------------------------------------------SRILLNPRDIDINMVNKSCNSWAIGVGDLVATSLNTFSTF-MVHD-KINYNI-DEP---SSSGKTLSIAF-VNQRQYRAQQC-FMSIKLVDNADGSTMLDKRYVNGNQLAIQNDLLESLSKALNQPWPQRMQETLQILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQ---SSPEFTYARAEKAL--VDIVRHSQHPLEAALNTEIDNIVTLPELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLE-MSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYW---IENGIFQTSVPYVVPYLDKFLAS----------------------
8	PROSPECT2	2ooeA	0.079	0.884	1.908	threading_8	MNPYDLDAWSILIREAQNQPEAEIKAKMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYIGMEIMSYQIWVDYINFLKGVEAVGSYA------------------ENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRN------------------------------APSVPPQPQEAQQVDMWKKYIQWEKS-----NPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLALLKKNMLLYFAYADYEVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGARFLAFESNIGDLASILKVEKREEYEGKETALLVDRCSASELKALGYK
9	HHPRED-g	3ly7_A	0.107	0.672	3.523	threading_9	---------------------------------------------------------------------------------------------------------------SRILLNPRDIDINMVNKSSSPYQLSYAIGVGDLVALNTFSTF-MVHDKIYNI-DEP---SSSGKTLSIAF-VNQRQYRAQQC-FMSIKLVDNADGSTMLDKRYVIGNQLAIQNDLLESLSKALNQPWPQRMQETQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGE---IVQSSPEFTYARAEKAL--VDIVRHSQHPLEKALNTEIDNIVTLPELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLE-MSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLY---WIENGIFQTSVPYVVPYLDKFLAS----------------------
10	HHPRED-l	1opc_A	0.188	0.210	1.511	threading_10	--------VIAFGKFKLNLGREMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGEYSAMERSIDVQISRLRRMVEEDPHPRYIQTVWGLGYVFVPD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.521 to 1w3bA SCOP code=a.118.8.1	TM-score=0.785 to 1w3bA SCOP code=a.118.8.1	TM-score=0.520 to 1w3bA SCOP code=a.118.8.1	TM-score=0.569 to 1gxqA SCOP code=a.4.6.1	TM-score=0.779 to 1w3bA SCOP code=a.118.8.1