Template-based Modeling Results for YGCR_ECOLI

Submitted Primary Sequence

>Length 259
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
CEEEEEEEECCCCCCCEECCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
2100000111122322122322021323212222113211000120000001023432332100000002430120022000000210000212212411120002001201332211000002212323212001000300211100101201032410201020341120020301000001212222110010321121141312212122422202001113244443111022421221032003211333234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
1	MUSTER	1efpB	0.233	0.927	3.021	threading_1	MKVLVPVKRLIDYNVKARVK-----SDGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGADRAILVVADVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGGLQTIAVSLPAVVTAD-LRLNEPRYASLPNIMKAKKKPLDEKTAADYGPRLEVVSVREPEGRKAGIKV--GSVDELVGKL-----------
2	SPARKS	1efvb	0.199	0.950	5.906	threading_2	LRVLVAVKRVIDYAVKIRVKP-----DRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTA-DLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGSKLSVISVEDPPQRTAGVKVE--TTEDLVAKLKEIGRI-----
3	PROSPECT2	1efvb	0.199	0.950	3.976	threading_3	LRVLVAVKRVIDYAVKIRVK-----PDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADL-RLNEPRYATLPNIMKAKKKKIEVIKPGDLTSKLSVISVEDPPQRTAGV--KVETTEDLVAKL-----KEIGRI
4	PPA-I	1efpB	0.233	0.927	4.092	threading_4	MKVLVPVKRLIDYNVKARVKS-----DGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGADRAILVVDDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGGLQTIAVSLPAVVTAD-LRLNEPRYASLPNIMKAKKKPLDEKTAADYGPRLEVVSVREPEGRKAGIK--VGSVDELVGKL-----------
5	HHPRED-l	1o97_C	0.218	0.919	7.237	threading_5	MKILVAVKQTAALE----EDFEIREDGMDVDEDFMMYDLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKDNKAVIRRELEGGLQEVEINCPAVLTIQL-GINKPRYAS----------PIEEVSLADIQSMSRVRRMYIPEK-GRATMIEG-TISEQAAKIIQ-IINEF---
6	HHPRED-g	1efp_B	0.242	0.927	6.581	threading_6	MKVLVPVKRLIDYNVKARVKS-----DGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGADRAILVVAADDQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGGLQTIAVSLPAVVTA-DLRLNEPRYASLPNIMKAKKKPLDEKTAADYGPRLEVVSVREPEGRKAGIKV--GSVDELVGKL-----------
7	SP3	1efvb	0.195	0.950	5.736	threading_7	LRVLVAVKRVIDYAVKIRVKP-----DRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAEALGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTA-DLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGSKLSVISVEDPPQRTAGVKVE--TTEDLVAKLKEIGRI-----
8	SAM-T99	2a1uB	0.212	0.946	6.793	threading_8	LRVLVAVKRVIDYAV----KIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEK-KLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVERAIDGGLETLRLKLPAVVTA-DLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGSKLSVISVEDPPQRTAGVKVE--TTEDLVAKLKEIGR------
9	MUSTER	2a1uB	0.200	0.946	3.003	threading_9	LRVLVAVKRVIDYAVKIRVK-----PDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAEALGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVERAIDGGLETLRLKLPAVVTAD-LRLNEPRYATLPNIMKAKKKKIEVIKPGDLGSKLSVISVEDPPQRTAGVKVE--TTEDLVAKLKEI----RI--
10	SPARKS	1efvb1	0.199	0.950	5.906	threading_10	LRVLVAVKRVIDYAVKIRVKP-----DRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTA-DLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGSKLSVISVEDPPQRTAGVKVE--TTEDLVAKLKEIGRI-----

Predicted Tertiary Structure


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TM-score=0.851 to 1efpB SCOP code=c.26.2.3	TM-score=0.843 to 1efpB SCOP code=c.26.2.3	TM-score=0.867 to 2a1uB SCOP code=c.26.2.3	TM-score=0.871 to 2a1uB SCOP code=c.26.2.3	TM-score=0.860 to 1efpB SCOP code=c.26.2.3