Template-based Modeling Results for YGCP_ECOLI

Submitted Primary Sequence

>Length 191
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
CCHHHHHHCCCEEEEECCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
45112113211000001312102200323020000010100102200320351212000000004002233200200131030200000212002003322110000000000100220031024121100100000002002200330411000000122131022004110100001221012102423
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
1	MUSTER	3ktsA	0.286	0.969	3.141	threading_1	LELP--FSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEGH----
2	SPARKS	3ktsa	0.286	0.969	4.763	threading_2	LEL--PFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEGH----
3	PROSPECT2	3ktsA	0.286	0.969	3.569	threading_3	LEL--PFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW----EGH
4	PPA-I	3ktsA	0.286	0.969	6.892	threading_4	--LELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEGH----
5	HHPRED-l	1vkf_A	0.323	0.874	7.096	threading_5	------F--KGIIAALWD-DSI---GEIEPDVVFLLKSDILNLKFHLKILKDRGKTVFVD-DFVNGLGEGEEAILFVKK-AGADGIITIKPKNYVVAKKNGIPAVLRFFALDSKAVERGIEQIETLGVDVVEVLPGVAPKVARKI---PGRTVIAAGLVETEEEAREILK-HVSAISTSSRILWK------
6	HHPRED-g	3kts_A	0.286	0.969	5.938	threading_6	--LELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEGH----
7	SP3	3ktsa	0.286	0.969	4.901	threading_7	LEL--PFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEGH----
8	SAM-T99	3ktsA	0.286	0.969	7.208	threading_8	--LELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEGH----
9	MUSTER	1vkfB	0.315	0.880	2.586	threading_9	--------FKGIIAALWD----DSIGEIEPDVVFLLKSDILNLKFHLKILKDRGKTVFVD-DFVNGLGEGEEAILFVKKA-GADGIITIKPKNYVVAKKNGIPAVLRFFALDSKAVERGIEQIETLGVDVVEVLPGVAPKVARKI---PGRTVIAAGLVETEEEAREILK-HVSAISTSSRILWKK-----
10	SPARKS	1vkfa	0.311	0.874	3.892	threading_10	--------FKGIIAALWD----DSIGEIEPDVVFLLKSDILNLKFHLKILKDRGKTVFVD-DFVNGLGEGEEAILFVKK-AGADGIITIKPKNYVVAKKNGIPAVLRFFALDSKAVERGIEQIETLGVDVVEVLPGAAPKVARKIP---GRTVIAAGLVETEEEAREILKHVS-AISTSSRILWK------

Predicted Tertiary Structure


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TM-score=0.861 to 1vkfB SCOP code=c.1.29.1	TM-score=0.859 to 1vkfB SCOP code=c.1.29.1	TM-score=0.860 to 1vkfB SCOP code=c.1.29.1	TM-score=0.860 to 1vkfB SCOP code=c.1.29.1	TM-score=0.859 to 1vkfB SCOP code=c.1.29.1