Template-based Modeling Results for YGCL_ECOLI

Submitted Primary Sequence

>Length 502
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
CCCCCCCEEEEEECCCCEEEEECHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
5422211100011242231110102101123311201122221100000000000110010322210231032212231023002100300112323110121221323322102200120112221200122232320000000000000102021222113111411100000020120100000100223313331133232331011232232332111221000200011000010023222030100133221100000123121213111121111022223323233310222222110000020001222333323311100210230233210000000011220000102220110231123003002200210210120013001100321333313222122331021201220120002001302333133001201220120012002301232232131011001011101320331233223344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
1	PROSPECT2	1kwha	0.078	0.839	1.508	threading_1	KEATWVTKIHMHFRDKWVWDENWVAKESFRLTNVKLQSVANKAATNSQEQFNLMMASVGGDNLKDKFIQYGQEGAHIKAFFKSHPEVERAIKAPDGNIYFIPYVPDGVKPPQNIDELDPNGNGKADEVPFIDRH-------PDEVFRLVNFWGARSSGSDNYMDFYIDNGRVKHPWAETAFRDGMVAQ----------------------WYKEGLIDKEIFTRKAKAREQMFGGNLGGFT--------------HDWFASTMTFNEGLAKTVPGFKLIPIAPPTNSKGQRWEEDSRQKVRPD--------GWAITVKNKNPVEYFSRPGRDISNFGVPGVTYDIKNGKAVSPQPVNNQLYDMGAQIPIGFWQDYDYERQWTTPEAQAGIDMYVK----GKYVMPGFEGVNMTREERAIYDKYWADVRTYMYEMGQAWGTKDVDKTWDEYQRQLKLRGLY--------------------QVLQMMQQAYDRQYK------N
2	PROSPECT2	1de4c	0.081	0.857	1.492	threading_2	LY---------------------------------------------WDDLKRKLSEKLDSTDFTSTIKLLNENSYVQKDENLALYVENQFRVKDSAQNSVIIVDKNGRLVYLVENPGGYVAYSKAATVTGKLVHANFGTKKDFE-----------------DLYTPVNGSIVIVRAGKITFAEKVANAESLNAIMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPP-------SRSSGLPNIPVQTISRAAAEKLFGNMEGDCPSDWKTDSTCRMVTSESKNVKLTVSNVLKGFVEPDHYVVVGAQRDAWGPGAAKSGMFSDMVLKDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLHLLYTLIEKTMQNLNKVARAAAEVAGQFVIKLTHDVELNLDYERYNSQLLSFVRDLNQ-YRADIKEMGLSL--QWLYSARGDFFRATSRLTTDFGNAEKTDRFVMKKLNDRVMRVLENLKLRKQNNGAFNI
3	PROSPECT2	1hr6a	0.110	0.763	1.471	threading_3	AR--TDNFKLSSLANGLKVATSNAETLELLGGNYQCTSSRENLNQDVGKMLQLMSETVRFPK------------ITEQELQEQKLSAEYEIDEVWMKPELV------------LPELLHTAAYSGETLGSPLICPRGLIPSISKYYLLDYRNKFY------------TPENTVAAFVGVPALELTGKYLGDWQSTHPPITKKVAQYTGGESCIPPAPVFGNLPELF-----------HIQIGF---------------------------------------------------EGLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNEDEVSRAKNQLKSSLLMNLES-----------------KLVELEDMGRQVLMHGRKIPVNEMISKIPDDISRVAEMIFTGAGNGKGRATVVMQGDRGSFGDVENVLKAYGL--GNSSS
4	PROSPECT2	1qbkb	0.086	0.930	1.468	threading_4	EQLNQYPDFN----------------NYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFP---------NGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDRPLNIIHSSPKIRSHAVIISRTQALLHIDSFTENLFALAGDEEPEVRKVLLEVRMDRLLPHHNIVEYLQRTQDACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFH----------HEWVVKLGAIAEGCQGIPYLPELIPHLIQCALVRSITCWTLSRYAHWVVSQPPDTYLKPLTLDSNKRVQEAACSAFAAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPESGFLPYCEPVYQRCVNLVQKTLAQALNNAQPDG
5	PROSPECT2	1gw5b	0.096	0.827	1.463	threading_5	SKYFTTN---------KKGEIFELKAELNNEKVNCMQTDNLELKKLVYLYLMNYAVKDCEDPNPLIRALAVRVDKITEYLCEPLRK------CLKDEDPYVRDINAQMVEDQGFLDSLRDLIADSN--------------PMVVANAVAALSEISESHPNSNLLDLNPQKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHAKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIV-----------------------QKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQAN--IAQVLAELKEYATEVDVDFV-------RKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKNYVVQEAIVVIRDIFRKYPNKYESI--------------------IATLCENLDSLDEPDARAAMIWIVIDNADELLESFLEGFHDESTQV------QLTLLTAIVKLFLKKPSETQ
6	MUSTER	1y3nA	0.096	0.853	0.842	threading_6	TWVTEKPKIHMHFRDKWVWD-WPVAREVARLKLVGVANRAATNSQEQFNLMMALPDIVGGDNLKDKFIRYGMEGAFIP-LNKLIDQNAPNLKFFKTHPEVQRAITAPDGNIYYLPYVPDGLVSR-RQDWLDKLHLKTPQTVDELYTVLKAFKEKDPNGGKADEIPFINRDPEEVFRLVN------FWGARSTGSNTWMDFYVENGKIKHPFAEVLIDPEIFTRKARSREQTF-------------GNNIGGMTH--DWFASTALFNDALSKNIPGFKLVPMAP--PINSKGQRWEEDARQIPRPDGWAIT-----------ATNKNPVETIKLFDFYFGPKGRELSNFGVPAQPVNNQMYDIGAQIPIGFWQDYEYERQWTNDVALQGIDMYIKN-------YVLPQFTGVNLTVEERIYDKYWPDVKTYMFEMGQSW-TKDPEKTWNDYQQQLKNR------------------FYQVMIVMQKAYDRQY-----------
7	SPARKS	1ihga	0.064	0.687	0.820	threading_7	------------------------------------------------------------------------------------------------------SHPSPQAKPS---------NPSNPRVFFDVDIGGERVVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKF----MIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGS----NTNGSQFFITTVPTPGKHVVFGQVIKGM-GVAKILENVEVKGEKPAKLCVIAECGELKEGDDWGIFPKDGSG------DSHPDFPEDADVDLKDVDKILLISEDLK--------------NIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAADADGAKLQPVALSCVLNIGACKLKMSD-----------WQGAVDSCLEAL-EIDPSNTKALYRRAQGWQYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAY-----
8	PROSPECT2	3smtA	0.088	0.791	1.447	threading_8	S------------------------------------------PKEILNLTSELLQK--CSSPAKEWEEY-------VQIRTLVEKIRKKQKGLSVTFDYFPDLKWASENGASVEGFEVNFKEEGFGLRATRDIKAEELGNIALAFHLLCERASPNSFWQPYIQTLPSEYDTPLYLQSTQAIHDVFSQYKNTARQYAYF-------YKVIHANKLPLKDSFTYEDYRWAVSSVTRQNQIPTEDGSRVTLALIPLTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTRSNAESGFFFDNNSHDRVKIK----LGVSKSDRLYAKAEVLAR---AGIPTSSVFALHFTEPPISAQLL---------------------AFLRVFCTEEELKEHLLGDSAIDRIFTLGNSEFPVSWDNEVKLWTFLEDRASLLLKTYKTT-------------IEEDKSVLKNHDLSVRAKAIKLRLLEKAVKSAAVNREYYRQQ------
9	PPA-I	3iv0A	0.085	0.841	0.818	threading_9	-------------------------------DFWAQGNET-NAEAFLLSIYNSFRNATSQRPFLTYSGDRCYSTGDKYVAYLANNDGELRNTYPDDARGGLIQWDVFYTAIQDANILLAEIDKVPGDE-----LKRSRFKAEAIFRSLSYFFIVRAFGDVPYYTNAPLPRTNVIVLQNLADLQPLLDDDPGAEVLPWSYSSYSSKGIRASVQFDAQNKEQYYRNVVSLGEELERNNGAYSLLDINRSSVIFAGGSDEGLFEIAQNINFNEIFNAKFSDNVSYSCLNKSPLFCYSGDYLTLFPYEDDARKELWFDEKIYSTSVSSSAPKEI------KKFWNIDTYGNGTITSN------------SGNQIVFRYAGALLLYAEALAALGTNDTKACELLNRVRNRAHASEINTS-------------------------GSELDAIFWERCRELIGEGHYYYDLVRTGKVYNRNYCNPTRTNFNVIHRNALKNNTQIGLNLF
10	HHPRED-l	2p0t_A	0.143	0.251	0.635	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHALVDLGERLTTLKAD---------VLA--------KLPLTDALR-------KALAEAPKHNIARKRHILFIGKL-RDQ-----DQE---------------AILVLLDQLDASTRFHNLERWRDRLIAGDDADLEKFVIEYPDDRQQLRSLIATSRKIFKYIRELDELQ-----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.670 to 3ck9B SCOP code=a.118.8.6	TM-score=0.752 to 1y3nA SCOP code=c.94.1.1	TM-score=0.486 to 2c0mC SCOP code=a.118.8.1	TM-score=0.575 to 1suvA SCOP code=i.21.1.1	TM-score=0.887 to 1y3nA SCOP code=c.94.1.1