Template-based Modeling Results for YGCI_ECOLI

Submitted Primary Sequence

>Length 224
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
CCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
55310002010002111221221222114100100000000000103232221022004201000101222233331212002110002113332422423301001021001000000020233122002201300321311011123001121100111032221120033132221301122223233221111211112232212212010121124358
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
1	PROSPECT2	2nxfA	0.098	1.000	1.093	threading_1	DPVFTFGLIYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQRDASDRALDTVDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQGSDLIGDDIYAYEFSPRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGRFVKFNGGFSEQQLQWLDALPVHPCAADPICLAWNHDGGRCTDSSGAETPPHSHAFATAYLGRGRVEDLS
2	PPA-I	3g6sA	0.083	0.920	1.029	threading_2	-KTDVRW------ATFNIRYDNPQDSLNNWQYRKDRVCQFIKDHELDEVLHNQFQDLRAGLPEYDGIGVGRDDGKTAGEYAPKDKYEVDSVGGWDAVCVRIATWAKFKDKATGKIFAVNTHFDHVGEEARRQSALLIIRKI-------KEIVGERPAVFNVTDASDAYETITTNEFVKDAY----KTAARVTGVDYTFHDFARIPAEDCEKLVKSCEIPAEVPE
3	HHPRED-l	3kg4_A	0.190	0.750	3.601	threading_3	LANRIRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILSAIH-WKPAI--------NWVIDKIYVLKPIRFESVRRN--------------------------RAATVLKDVAYVIEAHAVENTTKHIEMFKRRALKCFQQPCMGVREFPAHFALIDD--NDPLP------LSQLS------ESEFNRDLGWMLHDIDF----PHF-FRAE-LKNGVIDVP-
4	HHPRED-g	3kg4_A	0.185	0.750	5.113	threading_4	AN-RIRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILSAIH-WKPAIN--------WVIDKIYVLKPIRFESVRRN--------------------------RAATVLKDVAYVIEAHAVENTTKHIEMFKRRALKCFQQPCMGVREFPAHFALIDDN-DPLP-------LS-----QLSE-SEFNRDLGWMLHDIDF----THF-FRAEKVIDVPPFYA-
5	PROSPECT2	2ddrA	0.087	0.920	1.079	threading_5	NDTLKVMY-------------MLSTNLYPNWGQTERADLIGAADYIKNFDNSASDRLLGNLEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGAKGCLSNKGFVYTKIKKNDRFVHVIGTHLQAESPALKEIQDFIKN-----KNIPNNEYNVNKINAENNNDSEYASMFKTLNASVPSYTGHTATWDATTNSIAKYNFPDSPAEHANPSYIENKVLQPKSPQ
6	PROSPECT2	1utea	0.083	0.969	1.066	threading_6	PTPILRF-------VAVGDWGGVPNAPFHTAREMANAKAIATTVGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFERPRNLALARTQLAWIKKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVGHDHNLQYLQDENGLGFVLSFMDPSKKHLRKVPNGYLRFHFGAENSLG
7	PROSPECT2	2dxlA	0.062	0.938	1.051	threading_7	MLLAHI--------SDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERRPEEYQVARQILG------SLNYPLYLIPGNHDDKALFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTDETISWLEAQLFEGGDKPATPPLPLGNAQMDPIACENGHRLLALVERFPSNHSLTMTQYRQLPGTVHQVPYCHEDTDPYYDLSPASCLMHRQVGEQPT
8	PROSPECT2	3by9A	0.066	0.942	1.043	threading_8	RFQYQLDRFSSHIVAT-------LDKYAHIPHLISKDKELVDAL-LSAQNSAQIDITNRYLEQNTIASSNWNLDRSFIGRNFAWRPYFYLSIAGQKSTSGQRGYYYAYPVIYAAEILGVIVVKD-----LSAIEQGWQNKSSYFVATDDHFSSQPAWLFHSVADLSPAQRQSQQYLDSPIPSLGWQGDLQAEQSEWRKPEKHWLQDDYIVSSRPLPELALTIKI
9	MUSTER	3kg4A	0.182	0.786	0.785	threading_9	LANRIRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILSAIHWKPA--------------INWVIDK---------------IYVLKPIRFESVRRNRAATVLKDVAYVIEAHAVMTSKAGVDETKHIEMFKRRALKCFQQPCMGVREF----PAHFALIDDND------PLPLSQLS----ESEFNRDLGWMLHD--IDFTPHFF---RAELKNGVIDVPP
10	SPARKS	1e5ka	0.142	0.786	0.615	threading_10	MTTITGVVLAG-----GKARRMGGVDKGLLE----LNGLWQHV-------ADALMTQLSHVVVNANRHQEIYQASGLK---------VIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQRKAPVVWVHDGERDHP------TIALVNRAIEPLLLEYLQAGERRVMVFMRLAGGHAVDFSDHKDAFARWQ-----------------

Predicted Tertiary Structure


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TM-score=0.754 to 2nxfA SCOP code=d.159.1.12	TM-score=0.621 to 1zwxA SCOP code=d.151.1.3	TM-score=0.471 to 2av5A SCOP code=d.58.59.1	TM-score=0.450 to 1u8sB SCOP code=d.58.18.5	TM-score=0.643 to 1zwxA SCOP code=d.151.1.3