Template-based Modeling Results for YGCF_ECOLI


  Submitted Primary Sequence

>Length 223
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
CCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
4512011001012131222110000000100101011011221133243431212100110232332221213200100133222121000121110021012002102522010001010113241221010001130225211300120133122010001322213102200220223331000001123333002100200123311001000211324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
1MUSTER3c8fA0.1600.8701.045threading_1VIGRIHSFES-VDGPG-----IRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFM--------------NASGGGVTASGGEAIAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVTDLVMLDLKQMNDVSNHRTLEFAKYLAWIRYVVVPGDDDDSAHRLGEFTRDMGNEKIELLPYHEKKETMERVKGILEQYGHK-----VMF----
2SPARKS3c8fa0.1900.8741.740threading_2VIIHSFESCGTVDGPG-----IRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNA--------------SGGGVTASGGELQAEFVRDWFRACKKEGIHTCLDTNGFVRRYLEVTDLVMLDLKQMNDEIHQNLHRTLEFAKWIRYVVVPGDDDDSAHRLGEFTRDMGNEKIELLPYHEKKETMERVKGILEQYGHKVMF---------
3PROSPECT23c8fA0.1540.8741.753threading_3VIGRIHESCGTVDGPGI-----RFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLM--------------KEVVTYRHFMNASGGGVTASGGEAILQAVRDWFRACKKEGIHTCLDTNGFVRRYDEVTDLVMLDLKQMNDEILEFAKYLANKNVKVWIRYGWSDDDDSAHRLGEFTRDMGNVEKIEGVKPPKKETMERVKGILEQYGHKV---------MF
4PPA-I3c8fA10.2130.5470.918threading_4GRIHSFESCGTVDGPG-----IRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNAS--------------GGGVTASGGEAIAEFVRDWFRACKKEGIHTCLDTNGFVRRYD------------------PVIDELLEVTDLVM----------------------------------------------------------------
5HHPRED-l3c8f_A0.1940.8074.710threading_5GRIHSFESCGTVDGPGIR---FITF--FQGCLMRCLYCHNRDTWDTHGGK------------------EVTVEDLMKEVVTMNASGGGVTASGGEAILQAERDWFRACKKEGIHTCLDTNGFVRRYLEVTDLVMLDLKQMNDEIHQNLVG-----------VSNHRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTEQYGHKVMF---------
6HHPRED-g3c8f_A0.1780.8572.821threading_6IGIHSFESCGTVDGPGI---RFITF--FQGCLMRCLYCHNRDTWDTHGG------------------KEVTVEDLMKEVVTMNASGGGVTASGGEAILQEVRDWFRACKKEGIHTCLDTNGFVRRLLEVTDLVMLDLKQMNDENHRTLEFLANKNVKIRYVVVPSDDDDSAHRLGEFTRDMNVEKIELLPYHELGKTMERVKGILEQYGHKVMF---------
7SP33c8fa0.1920.9101.852threading_7VIIHSFESCGTVDGPG-----IRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEV--------------VTYRHFMNASGGGVTASGGEAILQ-AEFVRDWFRACGIHTCLDTNGFVRRYLEVTDLVMLDLKQMGVSNHRTLEFAKYLANWIRYVVGWSDDDDSAHRLGEFTRDMGNEKIELLPYHGKHKWVAMGEEYKLDGVKPPKKTMERVKGIL
8SAM-T993c8fA0.1800.8211.808threading_8-RIHSFESCGTVDGPGIRF--------FQGCLMRCLYCHNRDTWDTHG--------------------EVTVEDLMKEVVTYRHFGGGVTASGGEAILQFVRDWFRACKKEGIHTCLDTNGFVRRLLEVTDLVMLDLKQMNDEIYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHEKKETMERVKGILEQYGHKV-----------
9MUSTER3c8fA10.2050.5470.855threading_9VIIHSFESCGTVDGPGI---RFITFFQ--GCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNA--------------SGGGVTASGGEAIAEFVRDWFRACKKEGIHTCLDTNGFVRRYD------------------PVIDELLEVTD---LVM-------------------------------------------------------------
10SPARKS2yx0a0.1660.9461.268threading_10GRFCYKQKFYGIHSHRCLQMTPV----LAWCTHNCIFCMENFLGTELPQPWDDPAFIVEESIKAQKLLIGYKPKVDKKKFEEAWNPTHAAISLGEPMLYPMGDLVEEFHKRGFTTFIVTNGTIPKEDKLPTQLYVSIIPMIPDGWERILRFLELMRVVRLTLVKGENMHSPEKYAKLILKARPMFVEAKAYMNRINNHQDIREFAEA--------LVKHLPIE

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.583 to 1tv8A
SCOP code=c.1.28.3
TM-score=0.587 to 1tv8A
SCOP code=c.1.28.3
TM-score=0.599 to 1tv8A
SCOP code=c.1.28.3
TM-score=0.560 to 1wueA
SCOP code=c.1.11.2
TM-score=0.478 to 1vc1A
SCOP code=c.13.2.1