Template-based Modeling Results for YGBL_ECOLI

Submitted Primary Sequence

>Length 212
MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCCHHHCCHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS
54322321220121002000101321012001000001022110001011011120223000001031321223311320100000032124020000000200000000222322311310011001201200002123212330021003103312000011000000031021002001001200100010133213202221023135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS
1	MUSTER	2fuaA	0.272	0.953	3.399	threading_1	ME-----RNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQ-DGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILN----RSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLADPVPVLSDEEIAVVLE
2	SPARKS	1e4bp	0.257	0.953	4.809	threading_2	-----MERNKLARQIIDTCLEMTRLGLNQGTAGQVSVRY-QDGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSI----LNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIPVPVLSDEEIAVVLE
3	PROSPECT2	2opiA	0.254	0.929	3.734	threading_3	IT-------DEHIELFLAQAHRYGDAKLLCSSGNLSWRIGE-EALISGTGSWVPTLAKEKVSICNIASGTPTNGVKPSESTFHLGVLRERPDVNVVLHFQSEYATAISCKNK---PTNFNVTAEIPCHVGSEIPVIPYYRPGSPELAKAVVE-ALKHNSVLLTNHGQVVCGKDFDQVYERATFFEACRIIV--QSGGDYSVLTPEEIEDL-E
4	PPA-I	2fuaA	0.267	0.953	4.644	threading_4	-----MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQ-DGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSIL----NRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLTDPVPVLSDEEIAVVLE
5	HHPRED-l	1e4c_P	0.264	0.948	4.792	threading_5	-----MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQ-DGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPQSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRS----IPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLTDPVPVLSDEEIAVVL-
6	HHPRED-g	1e4c_P	0.267	0.953	3.919	threading_6	-----MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDG-MLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPQSEWRFHMAAYQSRPDANAVVHNHAVHCTAVS----ILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLADPVPVLSDEEIAVVLE
7	SP3	1e4bp	0.272	0.953	4.691	threading_7	ME-----RNKLARQIIDTCLEMTRLGLNQGTAGQVSVRYQD-GMLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSIL----NRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIPVPVLSDEEIAVVLE
8	SAM-T99	2fuaA	0.284	0.948	5.246	threading_8	-----MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDG-MLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPA-----IHYMIAAAGGNIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITPVPLSDEEIAVVLE
9	MUSTER	2opiB	0.264	0.929	3.083	threading_9	IT------DEHIELFLAQAHRYGD-AKLLCSSGNLSWRIGEE-ALISGTGSWVPTLAKEKVSICNIASGTPTNGVKPSESTFHLGVLRERPDVNVVLHFQSEYATAISCK----NKPTNFNVTAEIPCHVGEIPVIPYYRPGSPELAKAVVEAL-KHNSVLLTNHGQVVCGKDFDQVYERATFFEACRIIVQSG--GDYSVLTPEEIEDLEI
10	SPARKS	1jdia	0.203	0.953	4.400	threading_10	------MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREGVFVIKPSGVDYSIMTADDMVVVSIEGEVVEGAKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQA----GQSIPATGTTHADYFYGTIPCTRKMTDTGNVIVETFEKQAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLMQQTLLNKHYL

Predicted Tertiary Structure


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TM-score=0.952 to 2fuaA SCOP code=c.74.1.1	TM-score=0.952 to 2fuaA SCOP code=c.74.1.1	TM-score=0.948 to 2fuaA SCOP code=c.74.1.1	TM-score=0.833 to 2fuaA SCOP code=c.74.1.1	TM-score=0.950 to 2fuaA SCOP code=c.74.1.1