Template-based Modeling Results for YGBK_ECOLI

Submitted Primary Sequence

>Length 388
MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAIDALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVFSPALPVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEAQSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPLVTGGSGLAIGLARQWAQENGNQARKAGRPLAGRGVVLSGSCSQMTNRQVAHYRQIAPAREVDVARCLSIETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKASQAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPACRG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAIDALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVFSPALPVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEAQSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPLVTGGSGLAIGLARQWAQENGNQARKAGRPLAGRGVVLSGSCSQMTNRQVAHYRQIAPAREVDVARCLSIETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKASQAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPACRG
CCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCEEEECCEECCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAIDALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVFSPALPVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEAQSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPLVTGGSGLAIGLARQWAQENGNQARKAGRPLAGRGVVLSGSCSQMTNRQVAHYRQIAPAREVDVARCLSIETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKASQAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPACRG
4210000011010010000000212010000021221412320100000131221222201310120021024221210001000211021301010001000310422000000001221100120000013111220112212211112110020023213140120212013212310221012034322200000021230021002003212000001000100021023332332432222221200000000132012001202421201101022012232222102200210111222221000011223112101221112201200220012002201322021000110200010031120200200221132064
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAIDALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVFSPALPVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEAQSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPLVTGGSGLAIGLARQWAQENGNQARKAGRPLAGRGVVLSGSCSQMTNRQVAHYRQIAPAREVDVARCLSIETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKASQAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPACRG
1	MUSTER	3dqqA	0.782	0.995	2.715	threading_1	MLKIGVIADDFTGATDIASFLVENGMPTVQINDVPTGTQPEGCDAVVISLKTRSCPAQEAIKQSLAALVWLKKQGCQQVYFKYCSTFDSTAEGNIGPVTDALMVALDTSFTVISPALPVNGRTVYQGYLFVMNHLLAESGMRHHPINPMTDSYLPRLMEAQAQGRCGVIPAQTLDEGVAATRAALSRLQQEGYRYAVLDALNERHLEIQGEVLRDAPLVTGGSGLAMGLARQWAKHGVSR--SAGYPLSGRAVVLSGSCSQMTNQQVAFYRQHAPTRDVDVARCLSSETREAYAEALAQWVLSQDSELAPMISATASTQALAAIQQQYGATEASHAVEALFSLLAARLAEGGITRFIVAGGETSGVVTQSLGITGFHIGPCISPGVPW
2	SPARKS	1yzya	0.539	0.979	8.267	threading_2	---LGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKYCSTFDSTAKGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGDVLLSESGMKNHPITPMVDANLMRLMDAQAKGKTGLVAYADVIKGASRVQECFAELKAQGYRYAVVDAVDNSQLEVLAEAVADFKLVTGGSGLGAYMAARL--SGGKKGTNAFTPTKGKTVVLSGSCSVMTNKQVEKYREKAPHFQLDVEQAIHNEN---YIEQLYQWVIANLDSEFAPMVYATPPDALKAIQHQFGVDQASHAIENTFAKLAAKLKQYGVTNFITAGGETSSIVVQELGFTGFHIGKQIAPGVPW
3	PROSPECT2	3dqqA	0.785	0.995	4.987	threading_3	MLKIGVIADDFTGATDIASFLVENGMPTVQINDVPTGTQPEGCDAVVISLKTRSCPAQEAIKQSLAALVWLKKQGCQQVYFKYCSTFDSTAEGNIGPVTDALMVALDTSFTVISPALPVNGRTVYQGYLFVMNHLLAESGMRHHPINPMTDSYLPRLMEAQAQGRCGVIPAQTLDEGVAATRAALSRLQQEGYRYAVLDALNERHLEIQGEVLRDAPLVTGGSGLAMGLARQWAKHGV--SRSAGYPLSGRAVVLSGSCSQMTNQQVAFYRQHAPTRDVDVARCLSSETREAYAEALAQWVLSQDSELAPMISATASTQALAAIQQQYGATEASHAVEALFSLLAARLAEGGITRFIVAGGETSGVVTQSLGITGFHIGPCISPGVPV
4	PPA-I	1yzyA	0.546	0.982	3.479	threading_4	---LGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKYCSTFDSTAKGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGDVLLSESGMKNHPITPMVDANLMRLMDAQAKGKTGLVAYADVIKGASRVQECFAELKAQGYRYAVVDAVDNSQLEVLAEAVADFKLVTGGSGLGAYMAARLSG--GKKGTNAFTPTKGKTVVLSGSCSVMTNKQVEKYREKAPHFQLDVEQAIHNENYIEQLYQWVIANLD--SEFAPMVYATVPPDALKAIQHQFGVDQASHAIENTFAKLAAKLKQYGVTNFITAGGETSSIVVQELGFTGFHIGKQIAPGVPW
5	HHPRED-l	3dqq_A	0.787	0.992	9.887	threading_5	MLKIGVIADDFTGATDIASFLVENGMPTVQINDVPTGTQPEGCDAVVISLKTRSCPAQEAIKQSLAALVWLKKQGCQQVYFKYCSTFDSTAEGNIGPVTDALMVALDTSFTVISPALPVNGRTVYQGYLFVMNHLLAESGMRHHPINPMTDSYLPRLMEAQAQGRCGVIPAQTLDEGVAATRAALSRLQQEGYRYAVLDALNERHLEIQGEVLRDAPLVTGGSGLAMGLARQWAKHGVS--RSAGYPLSGRAVVLSGSCSQMTNQQVAFYRQHAPTRDVDVARCLSSETREAYAEALAQWVLSQDSELAPMISATASTQALAAIQQQYGATEASHAVEALFSLLAARLAEGGITRFIVAGGETSGVVTQSLGITGFHIGPCISPGVP-
6	HHPRED-g	3dqq_A	0.785	0.995	8.131	threading_6	MLKIGVIADDFTGATDIASFLVENGMPTVQINDVPTGTQPEGCDAVVISLKTRSCPAQEAIKQSLAALVWLKKQGCQQVYFKYCSTFDSTAEGNIGPVTDALMVALDTSFTVISPALPVNGRTVYQGYLFVMNHLLAESGMRHHPINPMTDSYLPRLMEAQAQGRCGVIPAQTLDEGVAATRAALSRLQQEGYRYAVLDALNERHLEIQGEVLRDAPLVTGGSGLAMGLARQWAKHGVS--RSAGYPLSGRAVVLSGSCSQMTNQQVAFYRQHAPTRDVDVARCLSSETREAYAEALAQWVLSQDSELAPMISATASTQALAAIQQQYGATEASHAVEALFSLLAARLAEGGITRFIVAGGETSGVVTQSLGITGFHIGPCISPGVPW
7	SP3	1yzya	0.539	0.979	7.840	threading_7	---LGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKYCSTFDSTAKGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGDVLLSESGMKNHPITPMVDANLMRLMDAQAKGKTGLVAYADVIKGASRVQECFAELKAQGYRYAVVDAVDNSQLEVLAEAVADFKLVTGGSGLGAYMAARL--SGGKKGTNAFTPTKGKTVVLSGSCSVMTNKQVEKYREKAPHFQLDVEQAIHNEN---YIEQLYQWVIANLDSEFAPMVYATVPDALKAIQHQFGVDQASHAIENTFAKLAAKLKQYGVTNFITAGGETSSIVVQELGFTGFHIGKQIAPGVPW
8	SAM-T99	1yzyA	0.543	0.982	7.131	threading_8	---LGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKYCSTFDSTAKGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGDVLLSESGMKNHPITPMVDANLMRLMDAQAKGKTGLVAYADVIKGASRVQECFAELKAQGYRYAVVDAVDNSQLEVLAEAVADFKLVTGGSGLGAYMAARLS--GGKKGTNAFTPTKGKTVVLSGSCSVMTNKQVEKYREKAPHFQLDVEQAIHNENYIE--QLYQWVIANLDSEFAPMVYATVPPDALKAIQHQFGVDQASHAIENTFAKLAAKLKQYGVTNFITAGGETSSIVVQELGFTGFHIGKQIAPGVPW
9	MUSTER	1yzyA	0.555	0.979	2.677	threading_9	---LGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKYCSTFDSTAKGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGDVLLSESGMKNHPITPMVDANLMRLMDAQAKGKTGLVAYADVIKGASRVQECFAELKAQGYRYAVVDAVDNSQLEVLAEAVADFKLVTGGSGLGAYMAARLSG--GKKGTNAFTPTKGKTVVLSGSCSVMTNKQVEKYREKAPHFQLDVEQAIHNE---NYIEQLYQWVIANLSEFAPMVYATVPPDALKAIQHQFGVDQASHAIENTFAKLAAKLKQYGVTNFITAGGETSSIVVQELGFTGFHIGKQIAPGVPW
10	SPARKS	3dlaa	0.111	0.879	0.664	threading_10	------------------------------SMNFYSAYQHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSQDSLLDAVEDALLDLVTESADLLPVLVVGAPHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYER-RQMAPGDGERGTIRIGGADVAFGTDLL---FAASDLPGFVLHVEDMFVPMPPSAEAALAGATVLANGRAEDRRLLARSASARAAGEGESTTDLAWDGQTMIWGAL-------LAESERFPKVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLDPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVISGG-LDSTHALIVATHAMD-----REGRPR

Predicted Tertiary Structure


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TM-score=0.845 to 1yzyA SCOP code=c.146.1.1	TM-score=0.845 to 1yzyA SCOP code=c.146.1.1	TM-score=0.947 to 1yzyA SCOP code=c.146.1.1	TM-score=0.851 to 1yzyA SCOP code=c.146.1.1	TM-score=0.953 to 1yzyA SCOP code=c.146.1.1