Template-based Modeling Results for YGAY_ECOLI


  Submitted Primary Sequence

>Length 394
MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMMILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRALLGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEAAN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMMILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRALLGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEAAN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMMILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRALLGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEAAN
5543333222000000000000000001001000210032020121000000000100000000000100111321300000000000000000003100000000001000000010000000210223210200000000000000001000000030000100000000000000000010013122324221120001000101123100010000000000000000000000121112112000000000000000002000000230212100000000000000001001000000000000000001001000100013022201210000000000000000000000002100000000000000000000002022334234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMMILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRALLGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEAAN
1MUSTER2gfpA0.1790.9342.017threading_1-----------LLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPR-TRLLTSYKTL-FGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAV-LGLSSMTVSILFILPIPAAFFGAWFAGPNKRFS--TLMWQSVICCLLAWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTG--GSLGLLMTLMGLLIVLCWLPL--------
2SPARKS2gfpa0.1860.9425.810threading_2-----------LLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPR--TRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAV-LGLSSMTVSILFILPIPAAFGAWFAGRPNKRFSTLMWQSVICCLLAGLWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTG-QGSLGLLMTLMGLLIVLCWLPL--------
3PROSPECT21pw4A0.1500.9972.758threading_3FKPAPHKARRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGATSSIAVMFVLLFLCGWFGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNWHAALYMPAFCAILVALFAFAMMRDTPQSCGLKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-KHFALDKSSWAYLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKAAGTAAGFTGLFGYLGGSVAASAVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGQELVP
4PPA-I2gfpA0.1730.9422.564threading_4-----------LLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPR--TRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAV-LGLSSMTVSILFILPIPAAFFGAWFAGPNKRFSTLMWQSVICCLLAGLWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTG-QGSLGLLMTLMGLLIVLCWLPL--------
5HHPRED-l3o7q_A0.1340.9646.169threading_5------RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFAEIMNYTLFLVGLFIIAAGLGCETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNSVQTPYMIIVAIVLLVALLIMLTFPALQSDNHSDKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG-GHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFI-VMTIIGGGIVTPVMGFVSDAGNIPTAELIPALCFAVIFIFARFRSQT-----
6HHPRED-g3o7q_A0.1370.9625.319threading_6------RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFAEIMNYTLFLVGLFIIAALGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNSVQTPYMIIVAIVLLVALLILTKFPALQSDNHSDKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVE-EIGMTAGFAANYTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA-GGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAGNIPTAELIPALCFAVIFIFARFRSQT-----
7SP32gfpa0.1910.9425.596threading_7-----------LLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPR--TRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAV-LGLSSMTVSILFILPIPAAFGAWFAGRPNKRFSTLMWQSVICCLLLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTG-QGSLGLLMTLMGLLIVLCWLPL--------
8SAM-T992gfpA0.1810.9113.811threading_8---------LLLMLVLLVAVGQMAQTIYI--PAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDARTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEA----CSGVLMGAVLGLSSMTVSILFILPIAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP--------------FLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLM------
9MUSTER1pw4A0.1430.9951.832threading_9LPAAEDPTYRRLRWQIFLGIFFGYAAYYLVRNFMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-KHFADKSSWAYFLYEYAGIPGTLLCGWMSDKFRGNRGATGVFFMTLVTIATIVYWAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFGWDGGFMVMIGGSILAVILLIVVMRHEQLLQ
10SPARKS1pw4a0.1440.9874.546threading_10IDPTYRRLRWQIFLGIFFGYAAYYKNFALAMPYL----VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPSIAVMFVLLFLCGWFQGGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNWHAALYMPAFCAILVALFAFAMMRDTPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-KHFALDKSSWAYFLYEYGIPGTLLCGWMSDKFRGNRGATGVFFMTLVTIATIVYPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWGGFMVMIGGSILAVILLIVVMIGEKRRHE

  Predicted Tertiary Structure

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TM-score=0.709 to 1pv6A
SCOP code=f.38.1.2
TM-score=0.720 to 1pv6A
SCOP code=f.38.1.2
TM-score=0.719 to 1pv6A
SCOP code=f.38.1.2
TM-score=0.915 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.718 to 1pv6A
SCOP code=f.38.1.2