Template-based Modeling Results for YFJP_ECOLI

Submitted Primary Sequence

>Length 287
MKNFEVLQPLQNSLSGLPLWVSERILQQINQLTHYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLPRLDLILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCLPREASSPVVALLQHPFRTTVAREQARDDFGETVGAILDTVSTFPLIPAPVRTIIQAVRSSVVSVARAVWDFFF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKNFEVLQPLQNSLSGLPLWVSERILQQINQLTHYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLPRLDLILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCLPREASSPVVALLQHPFRTTVAREQARDDFGETVGAILDTVSTFPLIPAPVRTIIQAVRSSVVSVARAVWDFFF
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCHHHHEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKNFEVLQPLQNSLSGLPLWVSERILQQINQLTHYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLPRLDLILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCLPREASSPVVALLQHPFRTTVAREQARDDFGETVGAILDTVSTFPLIPAPVRTIIQAVRSSVVSVARAVWDFFF
45223112102300320222013202310231242300000002121110000010041310101212102311021202124110000101112322231120021013102401000000203241222022003200231333200000000231332222312222122101310110132023112100001323210310031014003432221112112121011102220333113101100010231221322021002102200210021002111
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKNFEVLQPLQNSLSGLPLWVSERILQQINQLTHYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLPRLDLILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCLPREASSPVVALLQHPFRTTVAREQARDDFGETVGAILDTVSTFPLIPAPVRTIIQAVRSSVVSVARAVWDFFF
1	MUSTER	3ievA1	0.242	0.634	1.644	threading_1	--------------------------------HMKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNAQIIFLDTPGIYEPKVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKP-LNKPVIVVINKIDKIGPAKN-----------VLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPFPEDMIT-------------------------------------------------------------
2	SPARKS	3ieva	0.216	0.822	3.087	threading_2	--------------------------------HMKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNAQIIFLDTPGIYEPKVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKP-LNKPVIVVINKIDKIGP-----------AKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMITDLLAAEIVREKAMMLTREAVKINEIKPGDANPNMLVIKGEIIVDRENLKPIII-------
3	PROSPECT2	1wf3A	0.178	0.840	2.343	threading_3	EK-------------------------------TYSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAAKY---------------PEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFQTFGEWVAEILREEAMKRLWHEVPYAVATKVEEVAERENERPSQKAIVGRKIKEIGQATRKQLEALL
4	PPA-I	3ievA1	0.235	0.638	2.246	threading_4	--------------------------------HMKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNAQIIFLDTPGIKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIK-PLNKPVIVVINKIDKIGPAKN-----------VLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMIT------------------------------------------------------------
5	HHPRED-l	1xzp_A	0.152	0.920	1.671	threading_5	DEIETNTGEVVTRLERIKEKLTEELKKDAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSTNDVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILER----IKNKRYLVVINKVDVVEKINEEE----------------IKNKLGTDRHMVKISALKGEGLEKLEESIYRETQEIFERG-SDSLITNLRQKQLLENVKGHLEDAIKSLKE-GMPVDMASIDLERALNLLDEVTEDLLDTIFSNF-
6	HHPRED-g	2hjg_A	0.162	0.882	2.710	threading_6	THGLGLGDLLDAVAEHFKNIPE-------TKYNEEVIQFCLIGRPNVGKSSLVNA-LGEERVIVS---------VDTSFTYNQQEFVIVDTAG-RKKGKETTEKYSVLRAAIDRSEVVAVVLDGEEGIIEQDKRIAGYA--HEAGKAVVIVVNKWDAVDKD---EST-KEFEENIRDH-----FQFLDYAPILF-SALTKKRIHTL-PAIIKASENHSLRVQTNVLNDVI-DAVA-NPTPTHNGSRLKIYYATQVSVKPPSFVVFVNDEL-HFSYERFLRDAFGFEG
7	SP3	3ieva	0.207	0.843	2.973	threading_7	--------------------------------HMKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNAQIIFLDTPGIYEPKVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKP-LNKPVIVVINKIDKIGP-----------AKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMITDLPLRLLAAEIVREKAMMAVKINEIKPGDANPNMLVIKGEIIVDRENLKPIIKKG-QRLK
8	SAM-T99	1xzpA	0.149	0.909	3.383	threading_8	-VELDYPDEIETNTGEVVTRLERIKEKLTEELKKRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRETNDVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKN----KRYLVVINKVDVVEKINEEE----------------IKNKLGTDRHMVKISALKGEGLEKLEESIYRET-----QEIFERGSDSLITNLRQKQLLENVKGHLEDAIKSLKEGMPVDMASIDLERAFREDLLDTIFSNFCVGK
9	MUSTER	1wf3A1	0.219	0.638	1.600	threading_9	-------------------------------EKTYSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAAKY--------------PEEAMKAYHELL-PEAEPRMLSALDERQVAELKADLLALMPEGPFYPEDYAKSDQ----------------------------------------------------------
10	SPARKS	3r9wa	0.217	0.801	2.987	threading_10	--------------------------------HMKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNAQIIFLDTPGIYESDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKP-LNKPVIVVINKIDKIGP-----------AKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPFPEDMITDLEIVREKAMMLTREEVPTSIAVKINEIKPGDPNMLVIKGEIIVDREN-------------

Predicted Tertiary Structure


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TM-score=0.730 to 1wf3A SCOP code=c.37.1.8	TM-score=0.738 to 1wf3A SCOP code=c.37.1.8	TM-score=0.736 to 1wf3A SCOP code=c.37.1.8	TM-score=0.780 to 1wf3A SCOP code=c.37.1.8	TM-score=0.728 to 1wf3A SCOP code=c.37.1.8