Template-based Modeling Results for YFIN_ECOLI

Submitted Primary Sequence

>Length 408
MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEECCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR
553333223421203300210010000000010111100010100221023001000100110010000011030012002201322200100011434100011123443203100100021013120101011311000101000222100210110001000000010000100022012000200220020022132333112202332121023002101210220231223122212101210111101100000002200120022033432000000001203201011001000200120031014001331100101111000002203232202200210021032102033122000000000000132210220010001000102335233223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR
1	MUSTER	2v0nA	0.187	0.958	1.557	threading_1	LV--DDIEANVRLLEAKLTAE------YEVSTAMDGPTALAMAARDLPDMDGFTVCRKLKDDPTTRPVVL-GRGDRIQGLES------ASDFLTKPIDDVMLFARLTRFKLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAELGVEHRPVIESDPEKAKISAG-VDLVIVNAADGLRFTAALRSEERTRQLPPDDRGRMVKALEIGDPQELSARVKTQIQRKRYTDYLRNNLDHDQLTGLHNRRYMTGQLDSLVKRATLGGDVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDT-ALADALRIAERIRMHVSSPFTVAHGEMLNVTISIGVSATAGEGTPEALLKRADEGVYQAKASGRNAVVG
2	SPARKS	3mtka	0.261	0.375	4.624	threading_2	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLEFLAFYDELTGLPNKNSLIRWLNLKV--SQDCIDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGEGNKAFKIGFDRFAIICKSENISDFIERLSQ-----LLLPYNV-NGNLIRVNFNIGAAQIEAAA----NLRRCDLALIKAKEEGLNEYVI
3	PROSPECT2	1w25A	0.184	0.931	3.077	threading_3	SARVDDIEANVRLLEAKLTAEYYEVSTA----------------------MDGPTALAMAARDLPDIILLMDGFTVCRKLKDDPTTRHIPVVLITALDGSDFLTKPIDDVMLFARVRSLTRFKLRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAELPEKAKISAGGPVDLVIVGLRFTAALRSEERTRGRMVKALEIGVNDILSRPIDPQELSARV-----KTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDT-ALADALRIAERIRMHVSGPFTVAGREMLNVTISIGVSATAGEGTPEALLKRADEGVYQAKASGRNAVVH
4	PPA-I	3pjwA1	0.217	0.429	3.486	threading_4	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AALFQEQAERSEKLRTESYQDNLTGLANRRYFEMQLNARVSNPEQASSGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECETQNLVTRIRGGEFAVLAPGM-TREEALQLAQSLDSALSSLYAT-GATDVAAVASIGLAPFAHGDSPQAVLSLGDQALAQAEGQGEQNWAC
5	HHPRED-l	1w25_A	0.214	0.848	6.067	threading_5	ILVVDDIE------------------------------------------ANVRLLEAKLYYEVS---TAMDGPTALAMAAR--DLPDII---LL--------DVMMPGMDGFT-VCRKLKDDTRHIPVVLITALDGRASDFLTKPIDDVMLFARVRSLTRFKLVQRVAAELGVPEKAKISAGGPAAKNFDGLRFTAALRSEERTR-QLPMVDPDDRGRMVKALEILQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDT-ALADALRIAERIRMHVSSPFTVAGREMLNVTISIGVSATAGEGTPEALLKRADEGVYQAKASGRNAVV-
6	HHPRED-g	1w25_A	0.220	0.826	5.619	threading_6	ILVVDDIEANVRLLEAKLT---------------------------------------AEYYEV---STAMDGPTALAMAA---RD--LPDIILLD--------VMMPGMDGFTVCRKLKDDPTRHIPVV-------------LITALDGRRIQGLESGASDFLDVMLFARVRSLTRFKLVIDRFTAALRSEERT-RQLPVLAMVDPD-DRGRMVKALEILSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDT-ALADALRIAERIRMHVGSPFTVAGREMLNVTISIGVSATAGEGTPEALLKRADEGVYQAKASGRNAVVG
7	SP3	3mtka	0.268	0.375	4.312	threading_7	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLEFLAFYDELTGLPNKNSLIRWLNLKV--SQDCIDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGEGNKAFKIGFDRFAIICKSENISDFIERLSQLL-----LPYNV-NGNLIRVNFNIGAAQIEAAA----NLRRCDLALIKAKEEGLNEYVI
8	SAM-T99	3iclA	0.303	0.380	4.735	threading_8	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTVTGLPNRQLFCDRLLQALAAHERDGNVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAVRDGDTVARIGGDKFTILLNGAKDTLNGALVAQKILDGLAQPFVF-GAQQIVISVSIGIAVSPADGETEQLLRNADTA-YHAKSRGKNNYQF
9	MUSTER	3breB	0.231	0.743	1.497	threading_9	---------------------------------------------------------APLDGAVMVLLVDDQAMIGEAVRRSLASEAGIDFHFCSDNQIKILQDLVMPGVDGLTLLAAYRGNPATRD------------IPIIVLSTEPTVKSAAFAAGANDY---------------------LVKLPDAIELVARIRY-------------HSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGT-SPGGARLLAEKVRRTVELQISHDQPR-SHLTVSIGVSTLVPGGTFRVLIEMADQALYQAKNNGRNQVGL
10	SPARKS	3icla	0.303	0.380	4.283	threading_10	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTVTGLPNRQLFCDRLLQALAAHERDGPVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAVRDGDTVARIGGDKFTILLNGAKDTLNGALVAQKILDGLAQPFVF-GAQQIVISVSIGIAVSPADGETEQLLRNADTA-YHAKSRGKNNYQF

Predicted Tertiary Structure


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TM-score=0.647 to 2v0nA SCOP code=c.23.1.1	TM-score=0.603 to 2v0nA SCOP code=c.23.1.1	TM-score=0.578 to 2v0nA SCOP code=c.23.1.1	TM-score=0.645 to 2v0nA SCOP code=c.23.1.1	TM-score=0.573 to 2v0nA SCOP code=c.23.1.1