Template-based Modeling Results for YFIH_ECOLI

Submitted Primary Sequence

>Length 243
MSKLIVPQWPQPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGGEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGRMASFIWLI
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKLIVPQWPQPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGGEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGRMASFIWLI
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCCCEECCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKLIVPQWPQPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGGEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGRMASFIWLI
544111131221410100000221110212120000101011113202200310010021222000021011110010123222233110000123100000000100000001331200000100120000000210022111213100000000002400100230031013212322201123232000100100121014021210100220111233201012233220100000001
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKLIVPQWPQPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGGEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGRMASFIWLI
1	MUSTER	1rw0A	0.872	1.000	4.164	threading_1	MNALIVPQWPLPKGVAACSSTRIGGVSLSPYDSLNLGAHCGDNPEHVEENRKRLFAAGNLPSKPVWLEQVHGKNVLRLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNREGTEVAAAHAGWRGLCEGVLEETVTCFADKPENIIAWLGPAIGPAAFEVGPEVRDAFLAKDAQADSAFLPHGEKFLADIYQLARQRLANTGVEHVYGGDRCTFSESETFFSYRRDKTTGRMASFIWLI
2	SPARKS	1rv9a	0.496	0.988	6.931	threading_2	-KNFLTADWPAPANVKTLITTRNGGVSQGAYQSLNLGTHVGDNPEAVRRNREIVQQQVGLP--VAYLNQIHSTVVVNAAEALGGTPDADASVDDTGKVACAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEMMAYLGPAISADAFEVGQDVFDAFCTPMPEAATAFEGGSGKFLADLYALARLILKREGVGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLD
3	PROSPECT2	1rw0A	0.872	1.000	6.113	threading_3	MNALIVPQWPLPKGVAACSSTRIGGVSLSPYDSLNLGAHCGDNPEHVEENRKRLFAAGNLPSKPVWLEQVHGKNVLRLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNREGTEVAAAHAGWRGLCEGVLEETVTCFADKPENIIAWLGPAIGPAAFEVGPEVRDAFLAKDAQADSAFLPHGEKFLADIYQLARQRLANTGVEHVYGGDRCTFSESETFFSYRRDKTTGRMASFIWLI
4	PPA-I	1rw0A	0.872	1.000	5.548	threading_4	MNALIVPQWPLPKGVAACSSTRIGGVSLSPYDSLNLGAHCGDNPEHVEENRKRLFAAGNLPSKPVWLEQVHGKNVLRLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNREGTEVAAAHAGWRGLCEGVLEETVTCFADKPENIIAWLGPAIGPAAFEVGPEVRDAFLAKDAQADSAFLPHGEKFLADIYQLARQRLANTGVEHVYGGDRCTFSESETFFSYRRDKTTGRMASFIWLI
5	HHPRED-l	1z9t_A	1.000	0.971	7.459	threading_5	-SKLIVPQWPQPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTG--YASKRADASYSNTPGTVCAV-TADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGGEVREAF-AVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGR-ASFIWL-
6	HHPRED-g	1z9t_A	1.000	0.975	6.315	threading_6	-SKLIVPQWPQPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTG--YASKRADASYSNTPGTVCAV-TADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGGEVREAF-AVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGR-ASFIWLI
7	SP3	1rv9a	0.496	0.988	7.038	threading_7	-KNFLTADWPAPANVKTLITTRNGGVSQGAYQSLNLGTHVGDNPEAVRRNREIVQQQVGLP--VAYLNQIHSTVVVNAAEALGGTPDADASVDDTGKVACAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEMMAYLGPAISADAFEVGQDVFDAFCTPMPEAATAFEGGSGKFLADLYALARLILKREGVGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLD
8	SAM-T99	1rw0A	0.872	1.000	6.830	threading_8	MNALIVPQWPLPKGVAACSSTRIGGVSLSPYDSLNLGAHCGDNPEHVEENRKRLFAAGNLPSKPVWLEQVHGKNVLRLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNREGTEVAAAHAGWRGLCEGVLEETVTCFADKPENIIAWLGPAIGPAAFEVGPEVRDAFLAKDAQADSAFLPHGEKFLADIYQLARQRLANTGVEHVYGGDRCTFSESETFFSYRRDKTTGRMASFIWLI
9	MUSTER	1rv9A	0.496	0.988	3.869	threading_9	-KNFLTADWPAPANVKTLITTRNGGVSQGAYQSLNLGTHVGDNPEAVRRNREIVQQQVGLP--VAYLNQIHSTVVVNAAEALGGTPDADASVDDTGKVACAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEMMAYLGPAISADAFEVGQDVFDAFCTPMPEAATAFEGGSGKFLADLYALARLILKREGVGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLD
10	SPARKS	1xfja	0.376	0.996	6.697	threading_10	LPTVQSPLLSSLPGVKHAFFTRQGGVSKGIYDSLNVGRGSQDEPADVEENRARIARWFGGGEDLNVCYQIHSTIAIVADGSGDARPEGDAVVSKTPGV-ICGAAADCAPVLLVDPEARIVAAAHAGWRGALDGVVQSAVDRVEASPANITGVVGPCIGPKSYEVGLEFLHRFEADCPGSGRFFKPSEDKRFFDLPAFVLDRLATAGVERREWVGRDTRAEEEWFFSNRRDGDYGRLLSAITLE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=1.000 to 1rw0A TM-score=0.995 to native SCOP code=d.194.1.2	TM-score=1.000 to 1rw0A TM-score=0.995 to native SCOP code=d.194.1.2	TM-score=0.988 to 1rv9A TM-score=0.952 to native SCOP code=d.194.1.2	TM-score=1.000 to 1rw0A TM-score=0.995 to native SCOP code=d.194.1.2	TM-score=1.000 to 1rw0A TM-score=0.995 to native SCOP code=d.194.1.2

Experimental Structure

Download 1z9tA

SCOP code=d.194.1.2