Template-based Modeling Results for YFHR_ECOLI

Submitted Primary Sequence

>Length 284
MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN
55122022001000000000000100020021000013342213332201102020431220000001123232442100000000111102001100110032200000000201132312112110110020002002322323321000000000000000000212342020000101101011001200211111033211022002201300000000221320113102200210443220000230300101223102101210120022212344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN
1	MUSTER	2wtnB	0.221	0.782	1.668	threading_1	-------------------------------------------------GAMYIDC-DGIKLNAYLDMPKNNPEK--CPLCIIIHGFTGHSRHIVAVQETLNEIGVATLRADMYGHGKSDGKFELFKWLTNILAVVDYAKKLDFVTD--IYMAGHSQGGLSVMLAAAME-RDIIKALIPLSPAAMIPEIARTKLKGNYVRVAQTIRVEDFVDKY-TKPVLIVHGDQDEAVPYEASVAFSKQYK-NCKLVTIPGDTHC---YDHHLELVTEAVKEFMLEQIAK--
2	SPARKS	2wtma	0.215	0.785	2.407	threading_2	--------------------------------------------------GAMYIDCDGIKLNAYLDMPKNNPEK--CPLCIIIHGFTGHSRHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTWLTNILAVVDYAKKLDFVT--DIYMAGHSQGGLSVMLAAAME-RDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKN-CKLVTIPGDTHC---YDHHLELVTEAVKEFMLEQIAK--
3	PROSPECT2	3trdA	0.188	0.711	2.765	threading_3	-------------------------------------------SYVMTNEDFLIQGPVG-QLEVMITRPKG---IEKSVTGIICHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYDNVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVAYDQ---KVAQLISVAPPVFYEGF-------------------ASLTQM-ASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFH-------GRLIELRELLVRNLA---
4	PPA-I	2wtnB	0.215	0.785	1.907	threading_4	--------------------------------------------------GAMYIDCDGIKLNAYLDMPKNNPEK--CPLCIIIHGFTGHSRHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTWLTNILAVVDYAKKLDFVT--DIYMAGHSQGGLSVMLAAAME-RDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK-NCKLVTIPGDTHC---YDHHLELVTEAVKEFMLEQIAK--
5	HHPRED-l	2ecf_A	0.176	0.982	1.540	threading_5	RESQIPQRLSKAAASVYVDSWSIELFRANGEKITLVENDLADPKAQRPVEFGTLTAADKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKAS-DSYACGVAGAPVTDWGLYDSYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQQPFELMTYPGAKHGL--SGADALHRYRVAEAFLGRCLKP--
6	HHPRED-g	1tht_A	0.140	0.778	1.297	threading_6	---------------------------------------------QCKTIAHVLRVNNGQELHVWETPPK-ENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHV-------EFTMKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISDLE---LSFLITAVGVVNLRDTLEKALGFDDFHWDTLDSTLDKVANTS-VPLIAFTANNDDWVKQEEVYDMLAHIRTGCKLYSLLGSSHDLGE---NLVNFYQSVTKAAIAGSLEID
7	SP3	2wtma	0.221	0.782	2.439	threading_7	--------------------------------------------------GAMYIDCDGIKLNAYLDMPKNNPEK--CPLCIIIHGFTGHSRHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTWLTNILAVVDYAKKLDFVT--DIYMAGHSQGGLSVMLAAAME-RDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDEDFVDKY-TKPVLIVHGDQDEAVPYEASVAFSKQYK-NCKLVTIPGDTHC---YDHHLELVTEAVKEFMLEQIAK--
8	SAM-T99	3hi4A	0.214	0.725	1.930	threading_8	---------------------------------------------------STFVAKDGTQIYF--------KDWGSGKPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQK----PDYPGVPLDVFDFRPDMAKI-DVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV--THAQQLNEDLLAFLKR------
9	MUSTER	3pf8A	0.237	0.789	1.603	threading_9	------------------------------------------NLYFQGMATITLER-DGLQLVGTREEP----FGEIYDMAIIFHGFTANRSLLREIANSLRDENIASVRFDFNGHGDSDGKFEVLNEIEDANAILNYVKTDPHVR--NIYLVGHSQGGVVASMLAGLY-PDLIKKVVLLAPAATLKGDALEGLTLGGFYLRIQLPIYEVSAQF-TKPVCLIHGTDDTVVSPNASKKYDQIYQ-NSTLHLIEGADHC--FSDSYQKNAVNLTTDFLQN------
10	SPARKS	3pf8a	0.227	0.792	2.265	threading_10	------------------------------------------NLYFQGMATITLER-DGLQLVGTREE----PFGEIYDMAIIFHGFTANRSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTEIEDANAILNYVKTDPHVR--NIYLVGHSQGGVVASMLAGLY-PDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ-NSTLHLIEGADHC--FSDSYQKNAVNLTTDFLQN------

Predicted Tertiary Structure


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TM-score=0.754 to 2fukA SCOP code=c.69.1.36	TM-score=0.753 to 2fukA SCOP code=c.69.1.36	TM-score=0.739 to 2i3dB SCOP code=c.69.1.36	TM-score=0.790 to 2fukA SCOP code=c.69.1.36	TM-score=0.742 to 2fukA SCOP code=c.69.1.36