Template-based Modeling Results for YFHB_ECOLI

Submitted Primary Sequence

>Length 211
MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCEECCCCCCCHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHCCCCEEECCCHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE
5543322000000100002300000001100322111001000000000001012120121001001100112222210220022003101210121210122012013223010000000222002000120121321100001021111020122301022101101331212130000001132010001003110101232313324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE
1	MUSTER	3fvvA	0.170	0.976	2.421	threading_1	---TTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSL-TVQAVDVVRGHLAA-GDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIA
2	SPARKS	3fvva	0.170	0.976	3.783	threading_2	---TTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSL-TVQAVDVVRGHLAA-GDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIA
3	PROSPECT2	3fvvA	0.202	0.962	2.681	threading_3	---TTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSL-TVQAVDVVRGHLA-AGDLCALVTATNSFVTAPIARAFGVQ---HLIATDPEYRYTGRIEGTPSFREGKVVRVNQWLGLALGESYFYSDSVNDVPLLEAVTRPIAANPSPGLRELF
4	PPA-I	3fvvA	0.170	0.976	2.548	threading_4	---TTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRP-SLTVQAVDVVRGHLAA-GDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIA
5	HHPRED-l	3fvv_A	0.176	0.967	1.766	threading_5	-TT--RRLALFDLDHTLLPLDSDYQWADFLARTGRADPAEARRRNDDLMERYNRG-ELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIR-PSLTVQAVDVVR-GHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVLAGMGGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREI-
6	HHPRED-g	3fvv_A	0.176	0.972	2.556	threading_6	-T--TRRLALFDLDHTLLPLDSDYQWADFLARTGRADPAEARRRNDDLMERYNRGELTAEQAAEFMLG-LLAAHSPVELAAWHEEFMRDVIRPSLT--VQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWMGGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIA
7	SP3	3fvva	0.170	0.976	3.400	threading_7	---TTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSL-TVQAVDVVRGHLAA-GDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIA
8	SAM-T99	3fvvA	0.187	0.962	4.359	threading_8	---TTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLT--VQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGV---QHLIATDPEGRYTGRIEGTPSFREGKVVRVNQWLALGFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIA
9	MUSTER	1l7nB	0.139	0.886	1.803	threading_9	--EKKKKLILFDFDSTLVNNETIDEIAREA-------VEEEVKKITKEAEGKLNFEQSLRKRVSLL-----KDLPIEKVEKAIKRI---------TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKINLEDTVAVGDGANDISF-KKAGLKIAFCAKPILKEIE
10	SPARKS	1j97a	0.116	0.896	2.482	threading_10	---EKKKKLILFFDSTLVNNETIDEIAREA---GV--EEEVKKITKEAMEGKLNFEQSLRKRVSLL-----KDLPIEKVEKAIK--------RITPTEGAEETIKELKNR-GYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKEGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKA

Predicted Tertiary Structure


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TM-score=0.728 to 1l8oA SCOP code=c.108.1.4	TM-score=0.720 to 1l8oA SCOP code=c.108.1.4	TM-score=0.726 to 1l8oA SCOP code=c.108.1.4	TM-score=0.728 to 1l8oA SCOP code=c.108.1.4	TM-score=0.725 to 1l8oA SCOP code=c.108.1.4