Template-based Modeling Results for YFGC_ECOLI

Submitted Primary Sequence

>Length 487
MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM
4332012100000000000000000012213212311220021012221221022003102321321313201200220022003204224020100002133100000110000001000320322210000000000100121113112221210001000000000111112200100000110002202021233223101300010023111112000100221122232222122002112222122210221012021111322320100102010112212220011012211201121210010020100121321320140022003122220200100010012232132003102202313221100010010013122132003001300222331020011002003222222110001010011112032002001101221422122112012102203312331342343
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM
1	MUSTER	3c37A	0.318	0.439	1.349	threading_1	---------------------------------------KGFNISIEQEKELGNKFAVEIEKQQQPVNDPEVQRYVDKVGKRLLSGARAVEFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAADNETELAGVLAHEINHAVARHGTRQTQEYGYSLVLSLVLG--------------LAQLAGQLFG---KAGSYSREYENQADFLGVETY-KAGYNPNGLTSFFQKLNA-------------THPLTSERIQRVQAEIAKLPPQYLTDETEFKKIKGRLKLE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	2ooeA	0.082	0.947	2.219	threading_2	MAEKKLEEAWSILIREAQIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYARVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMQPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYLLVLGHHPYEAAQYLEQSSKLLAEKGDMNNAK-------LFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMK--YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYSKDKSVAFKIFELGLKKGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARF-------------LAFESNIGDLASILKVEKRRFTA----FREEYEGKETALLVDRSASELKALGYV
3	MUSTER	2gw1A	0.106	0.928	1.049	threading_3	YALALKDKGNQFFRN-YDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALEL-----KPDYSKVLLRRASANEGLGKFADFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKNLPSVTSMASFFGIFKPELTANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNKLKEKLAISLEHTGIFKFLKDPLGAHEDIKKAIELF---PRVNSYIY---ADRNDSTEYYNYFDKALKLD-SNNSSVYYHRGQMNFILQNY-DQAGKDFDKAKELDPEN--IFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENGIAPLVGKATLLTRNENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQED-----------------IDEAITLFEESADLAR--TMEEKLQAITFAEAAKVQQRIRSDPVL
4	SPARKS	3c37a	0.296	0.444	1.163	threading_4	---------------------------------------KGFNISIEQEKELGNKFAVEIEKQQQPVNDPEVQRYVDKVGKRLLSGARAVEFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAADNETELAGVLAHEINHAVARHGTRQTQEYGYSLVLSLVLG---------------DNLAQLAGQLFGKAGSYSREYENQADFLGVE-TYKAGYNPNGLTSFFQKLN-------------ATHPLTSERIQRVQAEIAKLPPQYLTDETEFKKIKGRLKLE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	PPA-I	3c37A	0.296	0.444	1.541	threading_5	---------------------------------------KGFNISIEQEKELGNKFAVEIEKQQQPVNDPEVQRYVDKVGKRLLSGARAVEFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAADNETELAGVLAHEINHAVARHGTRQTQEYGYSLVLSLVLG---------------DNLAQLAGQLFGKAGSYSREYENQADFLGVETY-KAGYNPNGLTSFFQKLNA-------------THPLTSERIQRVQAEIAKLPPQRYLTDTEFKKIKGRLKLE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	SPARKS	1w3ba	0.141	0.760	1.086	threading_6	-------------------------------GPMELAHREYQAGDFEAAERHCMQLWRQ---------EPDNTGVLLLLSSIHFQC-------------------------RR-----------------------------LDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRL-------KPDFIDGYINLAAALVAAG-DMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAV---AWSNLGCVFNAQGEIWLAIHHFEKAVTLD-PNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQD-------
7	HHPRED-l	3c37_A	0.296	0.444	4.084	threading_7	--------------------------------------KGFN-ISIEQEKELGNKFAVEIEKQQQPVNDPEVQRYVDKVGKRLLSGARAVEFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAADNETELAGVLAHEINHAVARHGTRQ-TQEYG--Y----SLVLSLVLG--DN---LAQL-AGQLFGKAG--SYSREYENQADFLGVET-YKAGYNPNGLTSFFQKLNA-------------THPLTSERIQRVQAEIAKLPPQRYTDETEFKKIKGRLKLE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	PROSPECT2	1w3bA	0.130	0.760	2.104	threading_8	GPMELAHREY-----------------------------------QAGDFEAAERHCMQLWRQEP--DNTGVLLLLSS-----------------------------------------IHFQCRRLDRSAHFSTLAI--------------KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRL--------KPDFIDGYINLAAALVAAGDME--GAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQ-PNFAVAWSNLGCVF-NAQGEIWLAIHHFEKAVTLDP--NFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF-----------ADAYSNMGNTLKEMQD
9	HHPRED-g	3c37_A	0.296	0.444	4.647	threading_9	--------------------------------------KGFN-ISIEQEKELGNKFAVEIEKQQQPVNDPEVQRYVDKVGKRLLSGARAVEFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAADNETELAGVLAHEINHAVARHGTRQ-TQEY--GYSL----VLSLVL--GDN---LAQL-AGQLFGKAG--SYSREYENQADFLGVET-YKAGYNPNGLTSFFQKLNA-------------THPLTSERIQRVQAEIAKLPPQRYLDETEFKKIKGRLKLE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	PPA-I	1w3bA	0.134	0.706	1.016	threading_10	-----------------------------------------------------------------------------------------------------------------------------------GPMELAHREYQAGDFEAAERHCMQLWRQETGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN-------PLLAEAYSNLGNVYKERG-QLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYN-PDLYCVRSDLGNLLKALGR-LEEAKACYLKAIETQP--NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEA

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.366 to 1h19A SCOP code=a.118.1.7	TM-score=0.837 to 2ooeA SCOP code=a.118.8.7	TM-score=0.372 to 1xm5A SCOP code=d.92.1.15	TM-score=0.532 to 1elwA SCOP code=a.118.8.1	TM-score=0.497 to 2q7fA SCOP code=k.38.1.1